RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 EXOC2Q96KP1 924 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 KCTD15Q96SI1 283 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-206ENST00000553529 CNPY3Q9BT09 278 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 SNRNP25Q9BV90 132 aaKnown RBP18.57■□□□□ 0.56
SHMT2-206ENST00000553529 CNOT8Q9UFF9 292 aaKnown RBP18.57■□□□□ 0.56
SHMT2-206ENST00000553529 AKAP13Q12802 2813 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 RAMP2O60895 175 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 SDC3O75056 442 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 PRKCIP41743 596 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 MAPKAPK2P49137 400 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 C21orf59P57076 290 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 SLC14A1Q13336 389 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 POLD3Q15054 466 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-206ENST00000553529 CARD16Q5EG05 197 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 EFHC2Q5JST6 749 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 FAM46CQ5VWP2 391 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF783Q6ZMS7 281 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 DBX2Q6ZNG2 339 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 ARHGAP36Q6ZRI8 547 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 DSG4Q86SJ6 1040 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF354CQ86Y25 554 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 RTL3Q8N8U3 475 aaKnown RBP18.56■□□□□ 0.56
SHMT2-206ENST00000553529 RHBDD1Q8TEB9 315 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 PPP1R9BQ96SB3 815 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 IFNKQ9P0W0 207 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 HECAQ9UBI9 543 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-206ENST00000553529 MYO6Q9UM54 1294 aa18.56■□□□□ 0.56
SHMT2-206ENST00000553529 PLXNB3Q9ULL4 1909 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 KNL1Q8NG31 2342 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 A0A1B0GTQ1 180 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 TMEM191CA6NGB0 347 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 RASA4BC9J798 803 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 RAD51BO15315 384 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 RASA4O43374 803 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 L1CAMP32004 1257 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 CLCN6P51797 869 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 NXPH1P58417 271 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF284Q2VY69 593 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 TXNRD3NBQ6F5E7 133 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 NAPEPLDQ6IQ20 393 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 RETSATQ6NUM9 610 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 IL27RAQ6UWB1 636 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 ERN2Q76MJ5 926 aaKnown RBP18.55■□□□□ 0.56
SHMT2-206ENST00000553529 TRIM69Q86WT6 500 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 NPWQ8N729 165 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 TMIEQ8NEW7 156 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 GATA6Q92908 595 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 DHX35Q9H5Z1 703 aaKnown RBP18.55■□□□□ 0.56
SHMT2-206ENST00000553529 AP4E1Q9UPM8 1137 aa18.55■□□□□ 0.56
SHMT2-206ENST00000553529 MAP1BP46821 2468 aaKnown RBP18.55■□□□□ 0.56
SHMT2-206ENST00000553529 PTPRBP23467 1997 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 J3KR12 359 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 KRIT1O00522 736 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 SLC7A4O43246 635 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 BUB1O43683 1085 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 KDELR3O43731 214 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 TMCC1O94876 653 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF883P0CG24 379 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 IL1R2P27930 398 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 MIPP30301 263 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 CCT8P50990 548 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 UBASH3AP57075 661 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 SEMG2Q02383 582 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 TPRG1LQ5T0D9 272 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 UNQ6494/PRO21346Q6UXR6 183 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 PCDH20Q8N6Y1 951 aaKnown RBP18.54■□□□□ 0.56
SHMT2-206ENST00000553529 ARHGEF26Q96DR7 871 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 ELF4Q99607 663 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-206ENST00000553529 HEPHQ9BQS7 1158 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 RALYQ9UKM9 306 aaKnown RBP18.54■□□□□ 0.56
SHMT2-206ENST00000553529 PCDHB9Q9Y5E1 797 aa18.54■□□□□ 0.56
SHMT2-206ENST00000553529 TLR4O00206 839 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 PCDH8O95206 1070 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 PRNPP04156 253 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 GYPCP04921 128 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 UGT2B4P06133 528 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 ADRB3P13945 408 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 RGRP47804 291 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 TPI1P60174 286 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 DNAJC3Q13217 504 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
SHMT2-206ENST00000553529 CYTH1Q15438 398 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 SMTNL2Q2TAL5 461 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 TDRD12Q587J7 1177 aaKnown RBP18.53■□□□□ 0.56
SHMT2-206ENST00000553529 GCNT7Q6ZNI0 430 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 NYAP1Q6ZVC0 841 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 RAB44Q7Z6P3 723 aaPredicted RBP18.53■□□□□ 0.56
SHMT2-206ENST00000553529 PRPF39Q86UA1 669 aaKnown RBP18.53■□□□□ 0.56
SHMT2-206ENST00000553529 SLC22A18ASQ8N1D0 253 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 TMEM145Q8NBT3 493 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 NSMCE3Q96MG7 304 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 CEP44Q9C0F1 390 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 SLC39A8Q9C0K1 460 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 THAP2Q9H0W7 228 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 MAGEH1Q9H213 219 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 PARVAQ9NVD7 372 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 LHX3Q9UBR4 397 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 FADS3Q9Y5Q0 445 aa18.53■□□□□ 0.56
SHMT2-206ENST00000553529 CHD8Q9HCK8 2581 aa18.52■□□□□ 0.56
SHMT2-206ENST00000553529 FAM149AA5PLN7 773 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms