RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NUP205Q92621 2012 aa18.78■□□□□ 0.6
CPSF2-202ENST00000553427 LRRC72A6NJI9 287 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 TMEM110-MUSTN1A8MSY1 372 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 BNIP3LO60238 219 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 CD48P09326 243 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 METAP1P53582 386 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 ARHGAP8P85298 464 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 IL10RBQ08334 325 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 CCDC15Q0P6D6 951 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 RFTN1Q14699 578 aaPredicted RBP18.77■□□□□ 0.6
CPSF2-202ENST00000553427 AGBL4Q5VU57 503 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 C11orf63Q6NUN7 778 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 LRRC49Q8IUZ0 686 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 SPC24Q8NBT2 197 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 KCTD6Q8NC69 237 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 OR2T34Q8NGX1 318 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 PPP1R16AQ96I34 528 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 GDAP1L1Q96MZ0 367 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 ZNF599Q96NL3 588 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 HDAC8Q9BY41 377 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 TM6SF2Q9BZW4 377 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 C6orf106Q9H6K1 298 aaPredicted RBP18.77■□□□□ 0.6
CPSF2-202ENST00000553427 TMEM74BQ9NUR3 256 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 SUSD2Q9UGT4 822 aa18.77■□□□□ 0.6
CPSF2-202ENST00000553427 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.77■□□□□ 0.6
CPSF2-202ENST00000553427 NUMA1Q14980 2115 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 GON4LQ3T8J9 2241 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 MEI4A8MW99 385 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 J3KR12 359 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 PLRG1O43660 514 aaKnown RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 BUB1BO60566 1050 aaPredicted RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 LEFTY1O75610 366 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 GJC1P36383 396 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 CNTN1Q12860 1018 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 PAFAH1B3Q15102 231 aaKnown RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 ATP13A4Q4VNC1 1196 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 DCAF12L1Q5VU92 463 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 SLC23A3Q6PIS1 610 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 DEFB119Q8N690 84 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 C12orf50Q8NA57 414 aaPredicted RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 VOPP1Q96AW1 172 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 CALN1Q9BXU9 219 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 OSBPL1AQ9BXW6 950 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 SP110Q9HB58 689 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 HECAQ9UBI9 543 aaPredicted RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 LHX3Q9UBR4 397 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 IPO11Q9UI26 975 aaKnown RBP18.76■□□□□ 0.59
CPSF2-202ENST00000553427 MFHAS1Q9Y4C4 1052 aa18.76■□□□□ 0.59
CPSF2-202ENST00000553427 CEP192Q8TEP8 1941 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 DFFAO00273 331 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 KPNA3O00505 521 aaPredicted RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 KHNYNO15037 678 aaKnown RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 PJA2O43164 708 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 PSTPIP1O43586 416 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 POP4O95707 220 aaKnown RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 IGSF6O95976 241 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 COMTP21964 271 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 ITGB7P26010 798 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 NOP2P46087 812 aaKnown RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 DNA2P51530 1060 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 CCR5P51681 352 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 VAV2P52735 878 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 RHOAP61586 193 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 MMRN1Q13201 1228 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 SF3A2Q15428 464 aaKnown RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 CYTH1Q15438 398 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 CCDC6Q16204 474 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 DUOXA1Q1HG43 343 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 MYLK3Q32MK0 819 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 ANKRD20A8PQ5CZ79 823 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 ARSIQ5FYB1 569 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 PIP5KL1Q5T9C9 394 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 TMCO4Q5TGY1 634 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 KIAA0895LQ68EN5 471 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 NCEH1Q6PIU2 408 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 LEKR1Q6ZMV7 388 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 RHOT1Q8IXI2 618 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 PCDH19Q8TAB3 1148 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 C1orf216Q8TAB5 229 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 RAPGEF5Q92565 580 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 ARRDC3Q96B67 414 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 DYRK4Q9NR20 520 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 DDX56Q9NY93 547 aaKnown RBP18.75■□□□□ 0.59
CPSF2-202ENST00000553427 LAMA1P25391 3075 aa18.75■□□□□ 0.59
CPSF2-202ENST00000553427 RCCD1A6NED2 376 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 SPOPO43791 374 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 IGHV4-34P06331 123 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 SERPINF2P08697 491 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 GNSP15586 552 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 KDELR1P24390 212 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 CSNK1DP48730 415 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 LIMK1P53667 647 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 NCBP2-AS2Q69YL0 99 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.74■□□□□ 0.59
CPSF2-202ENST00000553427 ERN2Q76MJ5 926 aaKnown RBP18.74■□□□□ 0.59
CPSF2-202ENST00000553427 RGL4Q8IZJ4 473 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 TXLNBQ8N3L3 684 aa18.74■□□□□ 0.59
CPSF2-202ENST00000553427 ATPAF2Q8N5M1 289 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms