RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PCP4P48539 62 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 CDK7P50613 346 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 NANOS2P60321 138 aaKnown RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 AP2B1P63010 937 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ENTPD8Q5MY95 495 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 RUSC1-AS1Q66K80 236 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 KLHL17Q6TDP4 642 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 KIAA1324Q6UXG2 1013 aaKnown RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 RTL10Q7L3V2 364 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ANKS1BQ7Z6G8 1248 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 KLBQ86Z14 1044 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 SLC44A2Q8IWA5 706 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 FAM110DQ8TAY7 271 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ZNF419Q96HQ0 510 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 NPAS1Q99742 590 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ISCUQ9H1K1 167 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 HIPK2Q9H2X6 1198 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ZNF304Q9HCX3 659 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 LRFN1Q9P244 771 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 LZTS1Q9Y250 596 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 DAAM1Q9Y4D1 1078 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 ABCC6O95255 1503 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 LY75O60449 1722 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 NSD2O96028 1365 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 RGPD2P0DJD1 1756 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 SYT5O00445 386 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 SMAD6O43541 496 aaKnown RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 HOXB9P17482 250 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 STAT1P42224 750 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 PGGT1BP53609 377 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 ICA1Q05084 483 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 UBE4AQ14139 1066 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 SEMA3AQ14563 771 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 ALG10Q5BKT4 473 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 ALG10BQ5I7T1 473 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 KDELC2Q7Z4H8 507 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 PABPC3Q9H361 631 aaKnown RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 MRPL44Q9H9J2 332 aaKnown RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 PDE11AQ9HCR9 933 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 SIRT3Q9NTG7 399 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-217ENST00000553287 ARL15Q9NXU5 204 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 NFAT5O94916 1531 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 LTN1O94822 1766 aa5.16□□□□□ -1.58
ATXN3-217ENST00000553287 QRICH2Q9H0J4 1663 aa5.15□□□□□ -1.58
ATXN3-217ENST00000553287 RPS10-NUDT3A0A1W2PQS6 291 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 MDM4O15151 490 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 TOMM70O94826 608 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 HEXIM1O94992 359 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 HMGB1P09429 215 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 HOXB6P17509 224 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 KLRC2P26717 231 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 CCKBRP32239 447 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 SLC16A2P36021 539 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 PNLIPRP1P54315 467 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 BRD3Q15059 726 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 SLC30A9Q6PML9 568 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 SLC16A12Q6ZSM3 486 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 TMEM217Q8N7C4 229 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 ENDOVQ8N8Q3 282 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 ADAMTS15Q8TE58 950 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 CPT1BQ92523 772 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 C3orf49Q96BT1 292 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 THOC3Q96J01 351 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 RMDN3Q96TC7 470 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 RBM38Q9H0Z9 239 aaKnown RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 PLCB1Q9NQ66 1216 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 PRDM8Q9NQV8 689 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 DACT1Q9NYF0 836 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 TBC1D14Q9P2M4 693 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 ZNF580Q9UK33 172 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 BAG5Q9UL15 447 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 C19orf53Q9UNZ5 99 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-217ENST00000553287 PKP3Q9Y446 797 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 TTC21BQ7Z4L5 1316 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 CCDC7Q96M83 1385 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 C5P01031 1676 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 USP54Q70EL1 1684 aa5.15□□□□□ -1.59
ATXN3-217ENST00000553287 TOGARAM1Q9Y4F4 1720 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 A0A0G2JLW4 131 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 TCRBV7S3A2A0A539 114 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 F5H423 210 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-217ENST00000553287 TNFRSF13BO14836 293 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-217ENST00000553287 KLKB1P03952 638 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 HSPA1AP0DMV8 641 aaKnown RBP5.14□□□□□ -1.59
ATXN3-217ENST00000553287 HSPA1BP0DMV9 641 aaKnown RBP5.14□□□□□ -1.59
ATXN3-217ENST00000553287 PRPH2P23942 346 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 ARRB2P32121 409 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 ZBTB16Q05516 673 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 CDK18Q07002 472 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 GALNTL6Q49A17 601 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 Q5PR19 223 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 SULT6B1Q6IMI4 303 aa5.14□□□□□ -1.59
ATXN3-217ENST00000553287 AAGABQ6PD74 315 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms