RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 TPRG1LQ5T0D9 272 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 DCAF12Q5T6F0 453 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 PIP5KL1Q5T9C9 394 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 KRT79Q5XKE5 535 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SEL1L3Q68CR1 1132 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 ZNF438Q7Z4V0 828 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SPRED1Q7Z699 444 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 APLFQ8IW19 511 aaPredicted RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 FUKQ8N0W3 1084 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 FSTL5Q8N475 847 aaPredicted RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 MYCT1Q8N699 235 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 RCBTB1Q8NDN9 531 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 OR8D1Q8WZ84 308 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 PNPLA2Q96AD5 504 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SNRNP40Q96DI7 357 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 TNIP3Q96KP6 325 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 TEFMQ96QE5 360 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SLC25A23Q9BV35 468 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 RAB34Q9BZG1 259 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SLC13A1Q9BZW2 595 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 CLPBQ9H078 707 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 RDH14Q9HBH5 336 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 CSNK1G1Q9HCP0 422 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 CHST11Q9NPF2 352 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 MRPL40Q9NQ50 206 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 ASF1BQ9NVP2 202 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SLC39A1Q9NY26 324 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SLCO3A1Q9UIG8 710 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 INTS6Q9UL03 887 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SARDHQ9UL12 918 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 ODF2LQ9ULJ1 636 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 PCDHGA9Q9Y5G4 932 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 MRPS18BQ9Y676 258 aaKnown RBP6.32□□□□□ -1.4
LINC02406-201ENST00000553029 SHANK1Q9Y566 2161 aa6.32□□□□□ -1.4
LINC02406-201ENST00000553029 ZNF106Q9H2Y7 1883 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 NPHP3-ACAD11A0A0J9YXS1 232 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 TBL1XO60907 577 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 FAM13AO94988 1023 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PCDH8O95206 1070 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 CPNE6O95741 557 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 IGHDP01880 384 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 TNNC2P02585 160 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 CELA2BP08218 269 aaPredicted RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 FAM200BP0CF97 657 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 CCDC130P13994 396 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 VAV1P15498 845 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PNLIPP16233 465 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 GLB1P16278 677 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 NNMTP40261 264 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SLC12A3P55017 1021 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ITGA1P56199 1179 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PPP2R2AP63151 447 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ECT2LQ008S8 904 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PTSQ03393 145 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 CCDC15Q0P6D6 951 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 STK3Q13188 491 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SEMA5AQ13591 1074 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ERV3-1Q14264 604 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ELOCQ15369 112 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 VWA2Q5GFL6 755 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 MPP7Q5T2T1 576 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 FOXD4L5Q5VV16 416 aaPredicted RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PAPD7Q5XG87 772 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ANKS6Q68DC2 871 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 LVRNQ6Q4G3 990 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 CCDC186Q7Z3E2 898 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SCD5Q86SK9 330 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PIM3Q86V86 326 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PRIMA1Q86XR5 153 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 TGIF2LYQ8IUE0 185 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 HOMEZQ8IX15 550 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 DIS3L2Q8IYB7 885 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 NRSN1Q8IZ57 195 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 IQCKQ8N0W5 287 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 LRRN4CLQ8ND94 238 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 AGBL5Q8NDL9 886 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 NDRG1Q92597 394 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 JAKMIP2Q96AA8 810 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 LMLNQ96KR4 655 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 RANBP9Q96S59 729 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 REEP2Q9BRK0 252 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 TRIM55Q9BYV6 548 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 PDE11AQ9HCR9 933 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 MLXIPLQ9NP71 852 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 STOML2Q9UJZ1 356 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 GPR34Q9UPC5 381 aa6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ZFR2Q9UPR6 939 aaKnown RBP6.31□□□□□ -1.4
LINC02406-201ENST00000553029 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms