RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TMIEQ8NEW7 156 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 OR2AP1Q8NGE2 309 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 PCDH19Q8TAB3 1148 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 PIP4K2CQ8TBX8 421 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 FAM131CQ96AQ9 280 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 GDAP1L1Q96MZ0 367 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 ZNF599Q96NL3 588 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 TM6SF2Q9BZW4 377 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 TSGA10Q9BZW7 698 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 SGK2Q9HBY8 427 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 IL36AQ9UHA7 158 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 PPM1HQ9ULR3 514 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 HYOU1Q9Y4L1 999 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 A0A1W2PP55 124 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 J3KR12 359 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SLC7A4O43246 635 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 BNIP3LO60238 219 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 IGSF6O95976 241 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 IL1BP01584 269 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CHRNA3P32297 505 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SLC8A1P32418 973 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CTNNA1P35221 906 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 HOXD12P35452 270 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 DRD3P35462 400 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 RHOAP61586 193 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SNRPD1P62314 119 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CCZ1BP86790 482 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CCZ1P86791 482 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 GALNT2Q10471 571 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 RFTN1Q14699 578 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 ODF2Q5BJF6 829 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 PEAR1Q5VY43 1037 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 LEKR1Q6ZMV7 388 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 ARHGAP36Q6ZRI8 547 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 TMEFF1Q8IYR6 380 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 KATNAL2Q8IYT4 538 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 PQLC3Q8N755 202 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CHST14Q8NCH0 376 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 GRIN3AQ8TCU5 1115 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 PPP1R16AQ96I34 528 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 HSPA12BQ96MM6 686 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 OMDQ99983 421 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 HEPHQ9BQS7 1158 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 BTBD1Q9H0C5 482 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 ZDHHC6Q9H6R6 413 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 FBXL12Q9NXK8 326 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 LHX3Q9UBR4 397 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SERGEFQ9UGK8 458 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 IPO11Q9UI26 975 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SARDHQ9UL12 918 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 NCKAP1Q9Y2A7 1128 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 WASF2Q9Y6W5 498 aa11.91□□□□□ -0.5
TRAFD1-209ENST00000552896 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 BCLAF3A2AJT9 711 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 GRID2IPA4D2P6 1211 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 MAFKO60675 156 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 LEFTY1O75610 366 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 RNASEH2AO75792 299 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 SEMA4FO95754 770 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 CCDC175P0C221 793 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 ITGB7P26010 798 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 MPLP40238 635 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 GARSP41250 739 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 MARCKSL1P49006 195 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 DHPSP49366 369 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 DNA2P51530 1060 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 METAP1P53582 386 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 ADPRHP54922 357 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 TAZQ16635 292 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 AGBL4Q5VU57 503 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 SLC9A4Q6AI14 798 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 FAM124AQ86V42 546 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 TP53INP2Q8IXH6 220 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 SYCE1Q8N0S2 351 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 PLD5Q8N7P1 536 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 NETO2Q8NC67 525 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 GANCQ8TET4 914 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 ANP32BQ92688 251 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 FATE1Q969F0 183 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 RBM41Q96IZ5 413 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 RNF157Q96PX1 679 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 CINPQ9BW66 212 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms