RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TBR1Q16650 682 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 HIF1AQ16665 826 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SGSM1Q2NKQ1 1148 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SETMARQ53H47 684 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 FAM26FQ5R3K3 315 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 PIK3R6Q5UE93 754 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 GUSBP11Q6P575 273 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CLEC18BQ6UXF7 455 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 RBM44Q6ZP01 1051 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 MMS22LQ6ZRQ5 1243 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 EPM2AIP1Q7L775 607 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 VASH2Q86V25 355 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 PIGZQ86VD9 579 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 TRIM69Q86WT6 500 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 JAMLQ86YT9 394 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CARNMT1Q8N4J0 409 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 PDILTQ8N807 584 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CLEC18CQ8NCF0 446 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 OR13H1Q8NG92 308 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF507Q8TCN5 953 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 EDEM1Q92611 657 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 GRAMD1AQ96CP6 724 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 RPL10LQ96L21 214 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SEMA3CQ99985 751 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 NT5C1AQ9BXI3 368 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CALN1Q9BXU9 219 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 ULBP1Q9BZM6 244 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SLC25A18Q9H1K4 315 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 EPN3Q9H201 632 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SYNDIG1Q9H7V2 258 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 USP29Q9HBJ7 922 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 FZD3Q9NPG1 666 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 DNAJC28Q9NX36 388 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 STOML2Q9UJZ1 356 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CEP83Q9Y592 693 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SHANK1Q9Y566 2161 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ITIH6Q6UXX5 1313 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC187A0A096LP49 1063 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ENO4A6NNW6 628 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 KIAA1324LA8MWY0 1029 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 MUSKO15146 869 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PLRG1O43660 514 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 NOBOXO60393 691 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 RNGTTO60942 597 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 LATS1O95835 1130 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ZBED1O96006 694 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 SRPRAP08240 638 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ITGA2BP08514 1039 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 SLFN14P0C7P3 912 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 NFKB1P19838 968 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 SLC6A4P31645 630 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PIK3CAP42336 1068 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 TKTL1P51854 596 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 EPHA4P54764 986 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 INHBCP55103 352 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CLDN2P57739 230 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CYP4F2P78329 520 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 DLG4P78352 724 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ECT2LQ008S8 904 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 INCA1Q0VD86 236 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CNTN1Q12860 1018 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CDH18Q13634 790 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ELAVL3Q14576 367 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CLCA4Q14CN2 919 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ZACNQ401N2 412 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF394Q53GI3 561 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FAM133BQ5BKY9 247 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FSCBQ5H9T9 825 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PITRM1Q5JRX3 1037 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PERM1Q5SV97 790 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 MPP7Q5T2T1 576 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 AGBL4Q5VU57 503 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 RNF219Q5W0B1 726 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 OR6B2Q6IFH4 312 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PTAR1Q7Z6K3 402 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 C14orf80Q86SX3 495 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC117Q8IWD4 279 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FBXO39Q8N4B4 442 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FAM26EQ8N5C1 309 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 KDM1BQ8NB78 822 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 TMEM145Q8NBT3 493 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 HJURPQ8NCD3 748 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 TPCN2Q8NHX9 752 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FIBINQ8TAL6 211 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PARD3BQ8TEW8 1205 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 RNF139Q8WU17 664 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 OR8D1Q8WZ84 308 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 TAF4BQ92750 862 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PTPRN2Q92932 1015 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 MYEOVQ96EZ4 313 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 DUSP23Q9BVJ7 150 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 APOBEC3GQ9HC16 384 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 LRRC4CQ9HCJ2 640 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 OLA1Q9NTK5 396 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 GEMIN8Q9NWZ8 242 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 FRRS1LQ9P0K9 344 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 TFIP11Q9UBB9 837 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms