RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TCEAL2Q9H3H9 227 aaPredicted RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 PRORYQ9H606 182 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 METTL14Q9HCE5 456 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 OSGEPQ9NPF4 335 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ADAMTS1Q9UHI8 967 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 KLF15Q9UIH9 416 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ZFR2Q9UPR6 939 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ITM2BQ9Y287 266 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 HS3ST4Q9Y661 456 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 NYNRINQ9P2P1 1898 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 MYO18BQ8IUG5 2567 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 LY6G6EA0A0G2JKS1 128 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 A0A1B0GTH6 734 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 A0A1B0GVM2 712 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TARSL2A2RTX5 802 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TYW5A2RUC4 315 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 POM121BA6NF01 834 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 LATO43561 262 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PLRG1O43660 514 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 FBXO21O94952 628 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PCDH8O95206 1070 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 MOCS3O95396 460 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 LATS1O95835 1130 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 MT-CO3P00414 261 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 IGLV3-25P01717 112 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 APOEP02649 317 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 AFPP02771 609 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ASLP04424 464 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SRPRAP08240 638 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 THEGLP0DJG4 465 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SRCP12931 536 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 C5AR1P21730 350 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 DGKAP23743 735 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 GNA15P30679 374 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 YWHAEP62258 255 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 DAB2P98082 770 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PTSQ03393 145 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SRSF6Q13247 344 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF211Q13398 564 aaPredicted RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 C1orf61Q13536 156 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 COX20Q5RI15 118 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 MPP7Q5T2T1 576 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ARTNQ5T4W7 220 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PIP5KL1Q5T9C9 394 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TAF3Q5VWG9 929 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 KIAA1614Q5VZ46 1190 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 NAPEPLDQ6IQ20 393 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TRNP1Q6NT89 227 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 C16orf46Q6P387 395 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TMPRSS12Q86WS5 348 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ERICH1Q86X53 443 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 CCDC117Q8IWD4 279 aaPredicted RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TRIM59Q8IWR1 403 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SPACA3Q8IXA5 215 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SLC22A18ASQ8N1D0 253 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SCML4Q8N228 414 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF843Q8N446 348 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 TTC39CQ8N584 583 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SPATA20Q8TB22 786 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 FUBP1Q96AE4 644 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 BTN2A3PQ96KV6 586 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 HSFY1Q96LI6 401 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 GSDMAQ96QA5 445 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 SPON2Q9BUD6 331 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 MUC3BQ9H195 1237 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 POPDC2Q9HBU9 364 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PIGVQ9NUD9 493 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 ZDHHC3Q9NYG2 299 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 VPS28Q9UK41 221 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 KIAA1257Q9ULG3 409 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PNMA8BQ9ULN7 279 aaPredicted RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 OR51B4Q9Y5P0 310 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 DNMT3AQ9Y6K1 912 aaPredicted RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 U3KQA8 63 aa7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 UTP20O75691 2785 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-214ENST00000551320 NAV2Q8IVL1 2488 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 CPED1A4D0V7 1026 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 GOLGA6L4A6NEF3 574 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 GOLGA8SH3BPF8 625 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 M0QYT0 321 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PSMA7O14818 248 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 SRGAP2O75044 1071 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 USP12O75317 370 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF821O75541 412 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 SMC2O95347 1197 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PAK4O96013 591 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 CELA2BP08218 269 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 CKMT2P17540 419 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 TGM2P21980 687 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 MSX1P28360 303 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 CHRNA3P32297 505 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ACVRL1P37023 503 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 RPL34P49207 117 aaKnown RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 ARRB1P49407 418 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 NFKB2Q00653 900 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 TLE3Q04726 772 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 LRRC63Q05C16 580 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ENPEPQ07075 957 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms