RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 SUSD3Q96L08 255 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PCYOX1Q9UHG3 505 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 A0A1B0GVM2 712 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 TCAF2A6NFQ2 919 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 QSOX1O00391 747 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 GOT1P17174 413 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 CTPS1P17812 591 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 CACHD1Q5VU97 1274 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ANKS1BQ7Z6G8 1248 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PHF13Q86YI8 300 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 LRRC57Q8N9N7 239 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 EIF3LQ9Y262 564 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 SLC27A6Q9Y2P4 619 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 RAD51BO15315 384 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 BUD23O43709 281 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 SOD2P04179 222 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PGM1P36871 562 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 AIF1P55008 147 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 MAXP61244 160 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 CYP2A13Q16696 494 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF572Q7Z3I7 529 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
NR4A1-215ENST00000550557 NTPCRQ9BSD7 190 aaKnown RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
NR4A1-215ENST00000550557 EVPLLA8MZ36 301 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ZSCAN9O15535 394 aaPredicted RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 NDUFB5O43674 189 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 TIMP1P01033 207 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 GJA1P17302 382 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ADRA1BP35368 520 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 GJA5P36382 358 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 CNTN1Q12860 1018 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SWT1Q5T5J6 900 aaKnown RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 PDE12Q6L8Q7 609 aaKnown RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 DACT3Q96B18 629 aaPredicted RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 CYP4F12Q9HCS2 524 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 CCNT2O60583 730 aaKnown RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 MGAT1P26572 445 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 OCA2Q04671 838 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 KLC1Q07866 573 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 DET1Q7L5Y6 550 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 CELF5Q8N6W0 485 aaKnown RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ZSWIM2Q8NEG5 633 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 PLD4Q96BZ4 506 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 LHX5Q9H2C1 402 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SHBGP04278 402 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 MAPK1P28482 360 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 RABGGTBP53611 331 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 KCNMB4Q86W47 210 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ACDQ96AP0 544 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SIX2Q9NPC8 291 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 INPP4BO15327 924 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 FMO4P31512 558 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 LRRC32Q14392 662 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 COLGALT2Q8IYK4 626 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
NR4A1-215ENST00000550557 FAM124BQ9H5Z6 455 aaPredicted RBP12.34□□□□□ -0.43
NR4A1-215ENST00000550557 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.43
NR4A1-215ENST00000550557 GLRA3O75311 464 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 ALPPL2P10696 532 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 GATMP50440 423 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 TUBGCP3Q96CW5 907 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 DPEP3Q9H4B8 488 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MINDY3Q9H8M7 445 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 CATSPERZQ9NTU4 200 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 BMP10O95393 424 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms