RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 INHBAP08476 426 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MYOGP15173 224 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 EPCAMP16422 314 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CA4P22748 312 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 HOXD9P28356 352 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 SSTR1P30872 391 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MAPK8P45983 427 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 SLC18A1P54219 525 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MAGOHP61326 146 aaKnown RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 USP4Q13107 963 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 PRSS36Q5K4E3 855 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 KCTD16Q68DU8 428 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 RETSATQ6NUM9 610 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CASC4Q6P4E1 433 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 ADGRD1Q6QNK2 874 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 UNC5AQ6ZN44 842 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 SLC26A11Q86WA9 606 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CIR1Q86X95 450 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CFAP52Q8N1V2 620 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 NETO2Q8NC67 525 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 UHMK1Q8TAS1 419 aaKnown RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 PEX13Q92968 403 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 TADA1Q96BN2 335 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 ALKBH8Q96BT7 664 aaKnown RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CFAP36Q96G28 342 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 GORASP1Q9BQQ3 440 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 WDR83Q9BRX9 315 aaKnown RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CINPQ9BW66 212 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 PIDD1Q9HB75 910 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
CACNB3-217ENST00000550483 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 YBX2Q9Y2T7 364 aaKnown RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-217ENST00000550483 CCDC195A0A1B0GUA6 201 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 FAM159BA6NKW6 160 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SMIM23A6NLE4 172 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 J3KR12 359 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 AVILO75366 819 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 FAM155BO75949 473 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 KRT37O76014 449 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 KRT38O76015 456 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 ARHGEF15O94989 841 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SERPINF2P08697 491 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 PAMP19021 973 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 HLA-DPA1P20036 260 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 MGAT1P26572 445 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 ADRA1AP35348 466 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 ACVRL1P37023 503 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 PLK1P53350 603 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SESN2P58004 480 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 DMC1Q14565 340 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 PCID2Q5JVF3 399 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 FYB2Q5VWT5 728 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 CXorf57Q6NSI4 855 aaKnown RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 NLRP9Q7RTR0 991 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 TMEM135Q86UB9 458 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 OR52K1Q8NGK4 314 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 FIBINQ8TAL6 211 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SH3RF2Q8TEC5 729 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SLC44A1Q8WWI5 657 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 OXNAD1Q96HP4 312 aaPredicted RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 RANBP9Q96S59 729 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 PAFAH2Q99487 392 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 NT5MQ9NPB1 228 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SOX13Q9UN79 622 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 SMG5Q9UPR3 1016 aaKnown RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 OBSL1O75147 1896 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 MTCL1Q9Y4B5 1905 aaKnown RBP12.76□□□□□ -0.37
CACNB3-217ENST00000550483 DOCK4Q8N1I0 1966 aa12.76□□□□□ -0.37
CACNB3-217ENST00000550483 POC1B-GALNT4F8VUJ3 575 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 MOSPD3O75425 235 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 BANF1O75531 89 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 RFPL2O75678 378 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 KRT15P19012 456 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 WNT3AP56704 352 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 ITKQ08881 620 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 MGAT5Q09328 741 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SLC10A7Q0GE19 358 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms