RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PAK4O96013 591 aaPredicted RBP23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 ADRB3P13945 408 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 CLDN2P57739 230 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 GNA12Q03113 381 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 SEL1L3Q68CR1 1132 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 ARCQ7LC44 396 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 CRELD1Q96HD1 420 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 FCRL3Q96P31 734 aaPredicted RBP23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 PRORYQ9H606 182 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 ANLNQ9NQW6 1124 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 AJAP1Q9UKB5 411 aaPredicted RBP23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 ZFR2Q9UPR6 939 aaKnown RBP23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 NBEAQ8NFP9 2946 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 CELSR3Q9NYQ7 3312 aa23.53■■□□□ 1.36
SMARCD1-209ENST00000550477 GOLGA8SH3BPF8 625 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 FPGTO14772 594 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 AP1G1O43747 822 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 PNMA6AP0CW24 399 aaPredicted RBP23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 RABIFP47224 123 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 POLD3Q15054 466 aaPredicted RBP23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 TMEM259Q4ZIN3 620 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 BROXQ5VW32 411 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 TAF3Q5VWG9 929 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 GCNT7Q6ZNI0 430 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 GPR155Q7Z3F1 870 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 RYBPQ8N488 228 aaPredicted RBP23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 FAM181AQ8N9Y4 354 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 ZNF248Q8NDW4 579 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 SLC39A7Q92504 469 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 RAB7BQ96AH8 199 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 ARHGEF26Q96DR7 871 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 APOLD1Q96LR9 279 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 ZNF578Q96N58 590 aaPredicted RBP23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 LGMNQ99538 433 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 WASF2Q9Y6W5 498 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 ITPR1Q14643 2758 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 DOCK4Q8N1I0 1966 aa23.52■■□□□ 1.36
SMARCD1-209ENST00000550477 TSPAN6O43657 245 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 OPA1O60313 960 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 FLT3P36888 993 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 KLHDC7AQ5VTJ3 777 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 KYAT3Q6YP21 454 aaKnown RBP23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 PARGQ86W56 976 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 FAM131BQ86XD5 332 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 PLPP6Q8IY26 295 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 CFAP57Q96MR6 1250 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 HECAQ9UBI9 543 aaPredicted RBP23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 FADS3Q9Y5Q0 445 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
SMARCD1-209ENST00000550477 TEX51A0A1B0GUA7 166 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 I6L893 689 aaPredicted RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 ATXN7O15265 892 aaPredicted RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 ERCC5P28715 1186 aaPredicted RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 CCNHP51946 323 aaPredicted RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 PCBP4P57723 403 aaKnown RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 CCDC173Q0VFZ6 552 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 DRC7Q8IY82 874 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 BTN2A2Q8WVV5 523 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 ISG20Q96AZ6 181 aaKnown RBP23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 STK33Q9BYT3 514 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 ZDHHC6Q9H6R6 413 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 TMPRSS4Q9NRS4 437 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 OR12D3Q9UGF7 316 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 FHOD1Q9Y613 1164 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 CSNK1G3Q9Y6M4 447 aa23.5■■□□□ 1.35
SMARCD1-209ENST00000550477 IGSF10Q6WRI0 2623 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 SPTY2D1-AS1A0A0U1RR47 76 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 ZMPSTE24O75844 475 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 CSF2P04141 144 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 UCHL3P15374 230 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 SNRPD1P62314 119 aaKnown RBP23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 ZCCHC8Q6NZY4 707 aaKnown RBP23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF677Q86XU0 584 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 SLC22A18ASQ8N1D0 253 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 TPCN2Q8NHX9 752 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 MAPK15Q8TD08 544 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 CPA5Q8WXQ8 436 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 GLMNQ92990 594 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 GRAMD1AQ96CP6 724 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 BMFQ96LC9 184 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 LENG8Q96PV6 779 aaPredicted RBP23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 TMEM59LQ9UK28 342 aa23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 FCF1Q9Y324 198 aaKnown RBP23.49■■□□□ 1.35
SMARCD1-209ENST00000550477 CAPN8A6NHC0 703 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 K7ESM1 405 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF821O75541 412 aaPredicted RBP23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 TPM2P07951 284 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 SDC4P31431 198 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 MAPKAPK2P49137 400 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 UCNP55089 124 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 ATP11AP98196 1134 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 RAD51Q06609 339 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 PDE1CQ14123 709 aaPredicted RBP23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 PTK2BQ14289 1009 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF542PQ5EBM4 170 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 CDCP2Q5VXM1 449 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 RWDD4Q6NW29 188 aaKnown RBP23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 ASB12Q8WXK4 309 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 IL12RB2Q99665 862 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 OSBPL2Q9H1P3 480 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms