RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 HEPHQ9BQS7 1158 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 TM6SF2Q9BZW4 377 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 HECAQ9UBI9 543 aaPredicted RBP19.69■□□□□ 0.74
DDX54-207ENST00000550016 IL36AQ9UHA7 158 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 PCDHA3Q9Y5H8 950 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 OTOGLQ3ZCN5 2332 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 MFSD11O43934 449 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 MAFKO60675 156 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 PALMO75781 387 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 POP4O95707 220 aaKnown RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 CTSLP07711 333 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 ZFXP17010 805 aaPredicted RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 CTNNA1P35221 906 aaKnown RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 CDKN2BP42772 138 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 CCNHP51946 323 aaPredicted RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 RHOAP61586 193 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 RFTN1Q14699 578 aaPredicted RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 TAZQ16635 292 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 ZNF662Q6ZS27 426 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 TMEFF1Q8IYR6 380 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 HDDC3Q8N4P3 179 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 ATPAF2Q8N5M1 289 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 AADATQ8N5Z0 425 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 EXD1Q8NHP7 514 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.68■□□□□ 0.74
DDX54-207ENST00000550016 KRT35Q92764 455 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 PDLIM2Q96JY6 352 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 ZNF599Q96NL3 588 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 AMFRQ9UKV5 643 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 GUCA1BQ9UMX6 200 aa19.68■□□□□ 0.74
DDX54-207ENST00000550016 RIF1Q5UIP0 2472 aaKnown RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 A0A1W2PP55 124 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 CCDC66A2RUB6 948 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 APOL1O14791 398 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 RNASEH2AO75792 299 aaKnown RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 PTMAP06454 111 aaKnown RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 CTNNA2P26232 953 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 MARCKSL1P49006 195 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 GALNT2Q10471 571 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 MYLK3Q32MK0 819 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 ARSIQ5FYB1 569 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 ATXN7L2Q5T6C5 722 aaPredicted RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 SLC9A4Q6AI14 798 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 SPOCD1Q6ZMY3 1216 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 PEX26Q7Z412 305 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 NT5DC3Q86UY8 548 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 RFX6Q8HWS3 928 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 RYBPQ8N488 228 aaPredicted RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 RBM41Q96IZ5 413 aaKnown RBP19.67■□□□□ 0.74
DDX54-207ENST00000550016 GDAP1L1Q96MZ0 367 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 GPR174Q9BXC1 333 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 BTBD1Q9H0C5 482 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 NEUROG2Q9H2A3 272 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 SGK2Q9HBY8 427 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 NCDNQ9UBB6 729 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 LHX3Q9UBR4 397 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 GMEB2Q9UKD1 530 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 FZD4Q9ULV1 537 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 WASF2Q9Y6W5 498 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 DOCK9Q9BZ29 2069 aa19.67■□□□□ 0.74
DDX54-207ENST00000550016 GPR179Q6PRD1 2367 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 GFRA3O60609 400 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 LEFTY1O75610 366 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 IGSF6O95976 241 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 RETP07949 1114 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 ACSL1P33121 698 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 DRD3P35462 400 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 GARSP41250 739 aaKnown RBP19.66■□□□□ 0.74
DDX54-207ENST00000550016 DHPSP49366 369 aaPredicted RBP19.66■□□□□ 0.74
DDX54-207ENST00000550016 GBE1Q04446 702 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 RAD51Q06609 339 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 SLC10A2Q12908 348 aaPredicted RBP19.66■□□□□ 0.74
DDX54-207ENST00000550016 TFDP3Q5H9I0 405 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 TMCO4Q5TGY1 634 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 DEFB119Q8N690 84 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 PLD5Q8N7P1 536 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 GRIN3AQ8TCU5 1115 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 RUBCNQ92622 972 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 ZNF419Q96HQ0 510 aaPredicted RBP19.66■□□□□ 0.74
DDX54-207ENST00000550016 LRIG1Q96JA1 1093 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 TSGA13Q96PP4 275 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 ZDHHC6Q9H6R6 413 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 SERGEFQ9UGK8 458 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 FAM186AA6NE01 2351 aa19.66■□□□□ 0.74
DDX54-207ENST00000550016 KPNA3O00505 521 aaPredicted RBP19.65■□□□□ 0.74
DDX54-207ENST00000550016 KRIT1O00522 736 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 EPN2O95208 641 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 SEMA4FO95754 770 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 MX2P20592 715 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 PEX5P50542 639 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 RENBPP51606 427 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 METAP1P53582 386 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 COPS2P61201 443 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 TFDP2Q14188 446 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 LBRQ14739 615 aaKnown RBP19.65■□□□□ 0.74
DDX54-207ENST00000550016 POM121L1PQ3SYA9 428 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.65■□□□□ 0.74
DDX54-207ENST00000550016 CCDC50Q8IVM0 306 aa19.65■□□□□ 0.74
DDX54-207ENST00000550016 CADM4Q8NFZ8 388 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms