RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 APOL1O14791 398 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 MID1O15344 667 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 RNASEH2AO75792 299 aaKnown RBP15.21■□□□□ 0.03
GPN3-206ENST00000549963 NEBLO76041 1014 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 IGLV3-19P01714 112 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 DPP6P42658 865 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 DHPSP49366 369 aaPredicted RBP15.21■□□□□ 0.03
GPN3-206ENST00000549963 COPS2P61201 443 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 GRM3Q14832 879 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 LPAL2Q16609 132 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 MYLK3Q32MK0 819 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 SYCP2LQ5T4T6 812 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 TIGD7Q6NT04 549 aaPredicted RBP15.21■□□□□ 0.03
GPN3-206ENST00000549963 DPY19L3Q6ZPD9 716 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 FAM124AQ86V42 546 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 HDDC3Q8N4P3 179 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 NPWQ8N729 165 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 EXD1Q8NHP7 514 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 CINPQ9BW66 212 aaPredicted RBP15.21■□□□□ 0.03
GPN3-206ENST00000549963 TM6SF2Q9BZW4 377 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 GOLPH3Q9H4A6 298 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 WSB2Q9NYS7 404 aaPredicted RBP15.21■□□□□ 0.03
GPN3-206ENST00000549963 FZD4Q9ULV1 537 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 SHROOM3Q8TF72 1996 aa15.21■□□□□ 0.03
GPN3-206ENST00000549963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 LRRC72A6NJI9 287 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 KPNA3O00505 521 aaPredicted RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 KRIT1O00522 736 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CD160O95971 181 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 RETP07949 1114 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CTNNA1P35221 906 aaKnown RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 CCNHP51946 323 aaPredicted RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 RWDD2BP57060 319 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CCZ1BP86790 482 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CCZ1P86791 482 aaPredicted RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 ARSIQ5FYB1 569 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 TFDP3Q5H9I0 405 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 PMS2CLQ68D20 193 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 NCBP2-AS2Q69YL0 99 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 ZNF662Q6ZS27 426 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 TMEFF1Q8IYR6 380 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 FRMD1Q8N878 549 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CCNYQ8ND76 341 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 CADM4Q8NFZ8 388 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 RUBCNQ92622 972 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 GPR174Q9BXC1 333 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 PCED1AQ9H1Q7 454 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 ZDHHC6Q9H6R6 413 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 PDFQ9HBH1 243 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 SEPT3Q9UH03 358 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 MBD1Q9UIS9 605 aaPredicted RBP15.2■□□□□ 0.02
GPN3-206ENST00000549963 MFHAS1Q9Y4C4 1052 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 ACTL7AQ9Y615 435 aa15.2■□□□□ 0.02
GPN3-206ENST00000549963 A0A1W2PP55 124 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 GRID2IPA4D2P6 1211 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 C3orf70A6NLC5 250 aaPredicted RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 SLC7A4O43246 635 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 GFRA3O60609 400 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 MAFKO60675 156 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 BCKDHBP21953 392 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 CCNCP24863 283 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 CTNNA2P26232 953 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 HSPA9P38646 679 aaKnown RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 GARSP41250 739 aaKnown RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 NR2C2P49116 596 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 NSUN2Q08J23 767 aaKnown RBP eCLIP15.19■□□□□ 0.02
GPN3-206ENST00000549963 ZNF235Q14590 738 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 CYTH1Q15438 398 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 WDR45BQ5MNZ6 344 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 MARC1Q5VT66 337 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 MFSD7Q6UXD7 560 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 SPOCD1Q6ZMY3 1216 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 GPR161Q8N6U8 529 aaKnown RBP15.19■□□□□ 0.02
GPN3-206ENST00000549963 PQLC3Q8N755 202 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 LRRC57Q8N9N7 239 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 NETO2Q8NC67 525 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 CHST14Q8NCH0 376 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 GRIN3AQ8TCU5 1115 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 BRD8Q9H0E9 1235 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 LZTFL1Q9NQ48 299 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 TRIM10Q9UDY6 481 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 PCDHGA5Q9Y5G8 931 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 HEY1Q9Y5J3 304 aa15.19■□□□□ 0.02
GPN3-206ENST00000549963 PPP1R12AO14974 1030 aaPredicted RBP15.18■□□□□ 0.02
GPN3-206ENST00000549963 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 MFSD11O43934 449 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 LEFTY1O75610 366 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 SEMA4FO95754 770 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 CDKN2BP42772 138 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 MAPK8P45983 427 aa15.18■□□□□ 0.02
GPN3-206ENST00000549963 CSNK1DP48730 415 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms