RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PCDH9Q9HC56 1237 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 ARFGAP3Q9NP61 516 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 THAP10Q9P2Z0 257 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF212Q9UDV6 495 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 STON1Q9Y6Q2 735 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 R4GN57 208 aa17.73■□□□□ 0.43
HDAC7-227ENST00000548080 WASH4PA8MWX3 477 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 IFNB1P01574 187 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 ETS1P14921 441 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 PRKCHP24723 683 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 OR1E1P30953 314 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 NUBP1P53384 320 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 GDF10P55107 478 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 PTPRNQ16849 979 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 B4GALNT4Q76KP1 1039 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 PRUNE1Q86TP1 453 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 GSPT2Q8IYD1 628 aaKnown RBP17.72■□□□□ 0.43
HDAC7-227ENST00000548080 LZTR1Q8N653 840 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 GLIS1Q8NBF1 620 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 OR7D4Q8NG98 312 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 TFB1MQ8WVM0 346 aaKnown RBP17.72■□□□□ 0.43
HDAC7-227ENST00000548080 SNF8Q96H20 258 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 RPL10LQ96L21 214 aaKnown RBP17.72■□□□□ 0.43
HDAC7-227ENST00000548080 TPSD1Q9BZJ3 242 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 SLC6A17Q9H1V8 727 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 GRHL1Q9NZI5 618 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 WHRNQ9P202 907 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 FBXO4Q9UKT5 387 aa17.72■□□□□ 0.43
HDAC7-227ENST00000548080 EML5Q05BV3 1969 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 A0A0D9SEW6 157 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 TCRBV21S2A2A0A5A6 115 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 PPP1R12AO14974 1030 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 KCNN4O15554 427 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 SNAP91O60641 907 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ZSCAN5DPP0CG00 497 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 RHOQP17081 205 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ITIH2P19823 946 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 MX2P20592 715 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 GLDCP23378 1020 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 IVDP26440 423 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 RBL1P28749 1068 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 VPS41P49754 854 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 PTPN5P54829 565 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 EIF4HQ15056 248 aaKnown RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 CRY1Q16526 586 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 EOGTQ5NDL2 527 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 BEND6Q5SZJ8 279 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ANO7Q6IWH7 933 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 TRMT11Q7Z4G4 463 aaKnown RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 NPWQ8N729 165 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 RTL3Q8N8U3 475 aaKnown RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ZNF557Q8N988 423 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 NETO2Q8NC67 525 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 BBOF1Q8ND07 529 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 TSTD1Q8NFU3 115 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 HMGB4Q8WW32 186 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ATOH1Q92858 354 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-227ENST00000548080 TTC17Q96AE7 1141 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 LRRC45Q96CN5 670 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 ALG14Q96F25 216 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 FEM1AQ9BSK4 669 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 FAM129AQ9BZQ8 928 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 KLC2Q9H0B6 622 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 BRD8Q9H0E9 1235 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 DONSONQ9NYP3 566 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 VPS28Q9UK41 221 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 TBC1D30Q9Y2I9 924 aa17.71■□□□□ 0.43
HDAC7-227ENST00000548080 A0A1W2PQF6 199 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 ZNF189O75820 626 aaPredicted RBP17.7■□□□□ 0.42
HDAC7-227ENST00000548080 DLDP09622 509 aaKnown RBP17.7■□□□□ 0.42
HDAC7-227ENST00000548080 ECHS1P30084 290 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 GPS1Q13098 491 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 CALCOCO2Q13137 446 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 SRSF5Q13243 272 aaKnown RBP17.7■□□□□ 0.42
HDAC7-227ENST00000548080 SDE2Q6IQ49 451 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 EMBQ6PCB8 327 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 MAMSTRQ6ZN01 415 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 NLRP14Q86W24 1093 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 CACUL1Q86Y37 369 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 RTP4Q96DX8 246 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 MRGPRX3Q96LB0 322 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 PHOX2BQ99453 314 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 PRRX2Q99811 253 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 SPON2Q9BUD6 331 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 SLCO3A1Q9UIG8 710 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 PLA2G4CQ9UP65 541 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 ERVW-1Q9UQF0 538 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 OR51B4Q9Y5P0 310 aa17.7■□□□□ 0.42
HDAC7-227ENST00000548080 TIMM44O43615 452 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 SEC31AO94979 1220 aaKnown RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 PAPSS2O95340 614 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ATP5BP06576 529 aaKnown RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 EPHX1P07099 455 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 RPL22P35268 128 aaKnown RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ACVRL1P37023 503 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 DGKEP52429 567 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 PLTPP55058 493 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms