RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CEP44Q9C0F1 390 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 ANO10Q9NW15 660 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 DAAM1Q9Y4D1 1078 aa13.61□□□□□ -0.23
CPSF6-204ENST00000547486 SIGLEC16A6NMB1 481 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 YKT6O15498 198 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 PCDH8O95206 1070 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 THEGLP0DJG4 465 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 RHOQP17081 205 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 L1CAMP32004 1257 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 NSFP46459 744 aaKnown RBP13.6□□□□□ -0.23
CPSF6-204ENST00000547486 ACADVLP49748 655 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 CCNHP51946 323 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-204ENST00000547486 GSCP56915 257 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-204ENST00000547486 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 FGL2Q14314 439 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 STX1AQ16623 288 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 PYROXD2Q8N2H3 581 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
CPSF6-204ENST00000547486 GBP4Q96PP9 640 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 AGPAT1Q99943 283 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 TM6SF2Q9BZW4 377 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 DYRK4Q9NR20 520 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 TMEM248Q9NWD8 314 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 HECAQ9UBI9 543 aaPredicted RBP13.6□□□□□ -0.23
CPSF6-204ENST00000547486 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 FADS3Q9Y5Q0 445 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 CELSR3Q9NYQ7 3312 aa13.6□□□□□ -0.23
CPSF6-204ENST00000547486 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 TRIM38O00635 465 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 RAD51BO15315 384 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 PAK4O96013 591 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 ADRB3P13945 408 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 GPD1P21695 349 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 ITGB7P26010 798 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 RPL7AP62424 266 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 CCDC15Q0P6D6 951 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 C19orf48Q6RUI8 117 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 OXR1Q8N573 874 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 C3orf20Q8ND61 904 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 OR13H1Q8NG92 308 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 OR6K2Q8NGY2 324 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 BAP1Q92560 729 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 BMFQ96LC9 184 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 SELENOOQ9BVL4 669 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 NOL6Q9H6R4 1146 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
CPSF6-204ENST00000547486 KLHL11Q9NVR0 708 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 UCKL1Q9NWZ5 548 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 RAXQ9Y2V3 346 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 GPSM3Q9Y4H4 160 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 PTPRBP23467 1997 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 LAMA5O15230 3695 aa13.59□□□□□ -0.23
CPSF6-204ENST00000547486 CXorf51AA0A1B0GTR3 108 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 TEX33O43247 280 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 CCP110O43303 1012 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 KDELR3O43731 214 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 RFPL3O75679 317 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 CALB1P05937 261 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 HNRNPA2B1P22626 353 aaKnown RBP13.58□□□□□ -0.24
CPSF6-204ENST00000547486 DGKAP23743 735 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 AKT2P31751 481 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 NEK3P51956 506 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 ZNF143P52747 638 aaPredicted RBP13.58□□□□□ -0.24
CPSF6-204ENST00000547486 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
CPSF6-204ENST00000547486 ZNF542PQ5EBM4 170 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 FBXL19Q6PCT2 694 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 Q6ZSR6 202 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 PARS2Q7L3T8 475 aaKnown RBP13.58□□□□□ -0.24
CPSF6-204ENST00000547486 IRF2BP2Q7Z5L9 587 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 ABI3BPQ7Z7G0 1075 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 SLFN11Q7Z7L1 901 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 TMPRSS12Q86WS5 348 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 SLC22A18ASQ8N1D0 253 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 ANKRD20A12PQ8NF67 263 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 TBC1D31Q96DN5 1066 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 PPP1R16AQ96I34 528 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 SLC17A9Q9BYT1 436 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 KLC2Q9H0B6 622 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 MAGEH1Q9H213 219 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 ZDHHC6Q9H6R6 413 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 TAS2R14Q9NYV8 317 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 DOCK9Q9BZ29 2069 aa13.58□□□□□ -0.24
CPSF6-204ENST00000547486 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 POM121BA6NF01 834 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 SPINT1O43278 529 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms