RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PREBQ9HCU5 417 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 FSCN3Q9NQT6 498 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 LCMT1Q9UIC8 334 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 WASF2Q9Y6W5 498 aa16.19■□□□□ 0.18
DDX54-204ENST00000546898 ANKRD36A6QL64 1941 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3DA0A087WVF3 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3IA0A087WXS9 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3EA0A087X179 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3KA0A087X1G2 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3FA6NER0 549 aaPredicted RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 UPK3BL1B0FP48 263 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3LB9A6J9 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 UPK3BL2E5RIL1 263 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 DAPK3O43293 454 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 LATO43561 262 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 BUB1O43683 1085 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 CER1O95813 267 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 H2AFZP0C0S5 128 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3HP0C7X1 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 SNRPD1P62314 119 aaKnown RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 RACK1P63244 317 aaKnown RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 SERINC3Q13530 473 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 DPYSL2Q16555 572 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 PPP6R3Q5H9R7 873 aaPredicted RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 PIP5KL1Q5T9C9 394 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3GQ6DHY5 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3CQ6IPX1 549 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 H2AFVQ71UI9 128 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TRIM69Q86WT6 500 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TBC1D3Q8IZP1 549 aaPredicted RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 OR2AP1Q8NGE2 309 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
DDX54-204ENST00000546898 TEKT4Q8WW24 435 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 ARRDC3Q96B67 414 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 HMCESQ96FZ2 354 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 HDAC8Q9BY41 377 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 LRRC19Q9H756 370 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 ZWILCHQ9H900 591 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 UVRAGQ9P2Y5 699 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 TRPM6Q9BX84 2022 aa16.18■□□□□ 0.18
DDX54-204ENST00000546898 CABIN1Q9Y6J0 2220 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 MED19A0JLT2 244 aaPredicted RBP16.17■□□□□ 0.18
DDX54-204ENST00000546898 ARHGAP42A6NI28 874 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 PCNX2A6NKB5 2137 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 H3BRJ5 948 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 MYO1FO00160 1098 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 PLK4O00444 970 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 AKR1B10O60218 316 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 LEFTY1O75610 366 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 GJB3O75712 270 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 TMCC1O94876 653 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 KCNK5O95279 499 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 ERCC2P18074 760 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 ITGB7P26010 798 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 IL1R2P27930 398 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 ARL4AP40617 200 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 DNA2P51530 1060 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 SLC14A1Q13336 389 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 POM121L1PQ3SYA9 428 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 ARSIQ5FYB1 569 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 NEK5Q6P3R8 708 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 ERN2Q76MJ5 926 aaKnown RBP16.17■□□□□ 0.18
DDX54-204ENST00000546898 SKA1Q96BD8 255 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 GDAP1L1Q96MZ0 367 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 TM6SF2Q9BZW4 377 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 HECAQ9UBI9 543 aaPredicted RBP16.17■□□□□ 0.18
DDX54-204ENST00000546898 ACTL7AQ9Y615 435 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 SLCO1B1Q9Y6L6 691 aa16.17■□□□□ 0.18
DDX54-204ENST00000546898 A0A1B0GVT2 93 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 IGSF6O95976 241 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 CSNK1EP49674 416 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 NEK3P51956 506 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 TAS2R38P59533 333 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 PPP2CBP62714 309 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 PPP2CAP67775 309 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 BNC1Q01954 994 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 SLC25A11Q02978 314 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 TBX2Q13207 712 aaPredicted RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 DPYSQ14117 519 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 KCNT1Q5JUK3 1230 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 ADAT2Q7Z6V5 191 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 LZTR1Q8N653 840 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 BTBD6Q96KE9 485 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 CCDC42Q96M95 316 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 SLC6A18Q96N87 628 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 OSBPL1AQ9BXW6 950 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 KLC2Q9H0B6 622 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 SLC32A1Q9H598 525 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 ZDHHC6Q9H6R6 413 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 EBF2Q9HAK2 575 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.16■□□□□ 0.18
DDX54-204ENST00000546898 CWC15Q9P013 229 aaKnown RBP16.16■□□□□ 0.18
DDX54-204ENST00000546898 CTTNBP2NLQ9P2B4 639 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 UBA2Q9UBT2 640 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms