RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CCDC15Q0P6D6 951 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 SLC10A2Q12908 348 aaPredicted RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 SRSF5Q13243 272 aaKnown RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 GRM3Q14832 879 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 MYLK3Q32MK0 819 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 PMS2CLQ68D20 193 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 LAIR1Q6GTX8 287 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 ARHGAP36Q6ZRI8 547 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 ATPAF2Q8N5M1 289 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 PIP4K2CQ8TBX8 421 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 HCAR2Q8TDS4 363 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 VOPP1Q96AW1 172 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 ERLEC1Q96DZ1 483 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 ZNF419Q96HQ0 510 aaPredicted RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 HES6Q96HZ4 224 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 GDAP1L1Q96MZ0 367 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 TNKS2Q9H2K2 1166 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 SP110Q9HB58 689 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 SGK2Q9HBY8 427 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 DTLQ9NZJ0 730 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 HECAQ9UBI9 543 aaPredicted RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 IL36AQ9UHA7 158 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 AMACRQ9UHK6 382 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 SARDHQ9UL12 918 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 RAB23Q9ULC3 237 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 CYP8B1Q9UNU6 501 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 CAPN6Q9Y6Q1 641 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 WASF2Q9Y6W5 498 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 hCG_1818297A0A087WSY0 165 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 C10orf142B7Z368 130 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 MATN3O15232 486 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 MID1O15344 667 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 MAP3K13O43283 966 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 MFSD11O43934 449 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 BCKDHBP21953 392 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 TGM2P21980 687 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 CETN2P41208 172 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 MARCKSL1P49006 195 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 CCNHP51946 323 aaPredicted RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 RHOAP61586 193 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 GBE1Q04446 702 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 RAD51Q06609 339 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 LBRQ14739 615 aaKnown RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 ELF2Q15723 593 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 RALGPS1Q5JS13 557 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 TIGD7Q6NT04 549 aaPredicted RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 LPCAT2Q7L5N7 544 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 TEX26Q8N6G2 289 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 UBL4BQ8N7F7 174 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 FRMD1Q8N878 549 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 CHST14Q8NCH0 376 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 NSMCE1Q8WV22 266 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 FOXJ1Q92949 421 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 HDAC11Q96DB2 347 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 TOE1Q96GM8 510 aaKnown RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 PPP1R16AQ96I34 528 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 OSBPL1AQ9BXW6 950 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 HDAC8Q9BY41 377 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 BTBD1Q9H0C5 482 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 KCNF1Q9H3M0 494 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 KDM4CQ9H3R0 1056 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 FBXL12Q9NXK8 326 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 LHX3Q9UBR4 397 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 SEPT3Q9UH03 358 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 TPX2Q9ULW0 747 aaKnown RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
DDX54-203ENST00000546869 WDFY4Q6ZS81 3184 aa14.7□□□□□ -0.06
DDX54-203ENST00000546869 PLXND1Q9Y4D7 1925 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 DDX3YO15523 660 aaKnown RBP14.69□□□□□ -0.06
DDX54-203ENST00000546869 LEFTY1O75610 366 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 IGSF6O95976 241 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 RETP07949 1114 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 DRD3P35462 400 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PLA2G5P39877 138 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 DPP6P42658 865 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 MAPK8P45983 427 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PSMD8P48556 350 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 DNA2P51530 1060 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PPIDQ08752 370 aaKnown RBP14.69□□□□□ -0.06
DDX54-203ENST00000546869 SLC10A7Q0GE19 358 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PDK1Q15118 436 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 ARSIQ5FYB1 569 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 MARC1Q5VT66 337 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PRR23BQ6ZRT6 265 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 BBS12Q6ZW61 710 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 BBS5Q8N3I7 341 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 AADATQ8N5Z0 425 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 FAM160A2Q8N612 972 aaPredicted RBP14.69□□□□□ -0.06
DDX54-203ENST00000546869 NETO2Q8NC67 525 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 TRIM58Q8NG06 486 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 MAML1Q92585 1016 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 ALG3Q92685 438 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms