RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
SSH1-205ENST00000546812 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.89
SSH1-205ENST00000546812 LMO7DNF2Z398 122 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 O00370 1275 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 KPNA3O00505 521 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 CETN3O15182 167 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 RAD51BO15315 384 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 SPINT1O43278 529 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 BNIP3LO60238 219 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 GCATO75600 419 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 CTSLP07711 333 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 JMJD7P0C870 316 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 CD19P15391 556 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 RPL13P26373 211 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 CHRNA3P32297 505 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 GTF2H1P32780 548 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 CCR10P46092 362 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 RGS7P49802 495 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 ADKP55263 362 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 RPS21P63220 83 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 C1QBPQ07021 282 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 EIF2B5Q13144 721 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 KCNAB2Q13303 367 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 ADAM9Q13443 819 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 PDE1CQ14123 709 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 NCAPHQ15003 741 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 CXorf57Q6NSI4 855 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 PMF1Q6P1K2 205 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 BORAQ6PGQ7 559 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 CCAR2Q8N163 923 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 TMIEQ8NEW7 156 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 DQX1Q8TE96 717 aaKnown RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 SLC35F5Q8WV83 523 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 RNF34Q969K3 372 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 ALG14Q96F25 216 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 MED15Q96RN5 788 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 PPP1R9BQ96SB3 815 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 FEM1AQ9BSK4 669 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 HDAC8Q9BY41 377 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 MMRN2Q9H8L6 949 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 DYRK4Q9NR20 520 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 SPASTQ9UBP0 616 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 PISDQ9UG56 409 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 SLC25A13Q9UJS0 675 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 TUBD1Q9UJT1 453 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 ANAPC2Q9UJX6 822 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 KIAA1257Q9ULG3 409 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 COL27A1Q8IZC6 1860 aaPredicted RBP9.46□□□□□ -0.9
SSH1-205ENST00000546812 RP1P56715 2156 aa9.46□□□□□ -0.9
SSH1-205ENST00000546812 PRAMEF33A0A0G2JMD5 474 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 A0A1W2PQC6 194 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 D6RAR5 112 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 F5H5T6 163 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 PIK3R2O00459 728 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 YY2O15391 372 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 SLC16A3O15427 465 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 PRAMEF10O60809 474 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 APOEP02649 317 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 EPB41P11171 864 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 VDRP11473 427 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 KRT13P13646 458 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 CCKBRP32239 447 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 C1orf61Q13536 156 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 FGL2Q14314 439 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 CCDC40Q4G0X9 1142 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 ZC3H12AQ5D1E8 599 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 PRRT3Q5FWE3 981 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 TPRG1LQ5T0D9 272 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 TTC39BQ5VTQ0 682 aaPredicted RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 ESRP1Q6NXG1 681 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 FOXR2Q6PJQ5 311 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 ERN2Q76MJ5 926 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 ZFAND4Q86XD8 727 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 SH2D3CQ8N5H7 860 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 FBXL13Q8NEE6 735 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 OR2A12Q8NGT7 310 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 FEM1CQ96JP0 617 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 BTN2A3PQ96KV6 586 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 HSFY1Q96LI6 401 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 TMEM74Q96NL1 305 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 LENG8Q96PV6 779 aaPredicted RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 GFM1Q96RP9 751 aaKnown RBP9.45□□□□□ -0.9
SSH1-205ENST00000546812 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 RAB20Q9NX57 234 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 NAALADL1Q9UQQ1 740 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms