RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 DUSP10Q9Y6W6 482 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 MUC6Q6W4X9 2439 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 IGLV3-10A0A075B6K4 115 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 FAM170BA6NMN3 283 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 E9PAM4 449 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PSTPIP1O43586 416 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TSPAN3O60637 253 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TBL1XO60907 577 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 LRIG2O94898 1065 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 COMTP21964 271 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 HOXC13P31276 330 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 GJA4P35212 333 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 EIF2DP41214 584 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 SLC1A1P43005 524 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 IRAK1P51617 712 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TAS2R40P59535 323 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TPI1P60174 286 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 RPS24P62847 133 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 ZXDAP98168 799 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PRKCQQ04759 706 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 GAD2Q05329 585 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 KDSRQ06136 332 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 SIGLEC14Q08ET2 396 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 SEMA3BQ13214 749 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 CDH18Q13634 790 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DPYSL2Q16555 572 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 CA9Q16790 459 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 HADHQ16836 314 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 MPPE1Q53F39 396 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PPP6R3Q5H9R7 873 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 KCNT1Q5JUK3 1230 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 MPP7Q5T2T1 576 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 NAIF1Q69YI7 327 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TXNRD3NBQ6F5E7 133 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 FBXL22Q6P050 247 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 C1orf228Q6PIY5 440 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 RHBDF2Q6PJF5 856 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF662Q6ZS27 426 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 CHST9Q7L1S5 443 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 C14orf80Q86SX3 495 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DAAM2Q86T65 1068 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 RALGPS2Q86X27 583 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PSTKQ8IV42 348 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 MFN1Q8IWA4 741 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF683Q8IZ20 524 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 ADGRG2Q8IZP9 1017 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PYROXD2Q8N2H3 581 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 LRRC57Q8N9N7 239 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 GPBAR1Q8TDU6 330 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DDI1Q8WTU0 396 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TEKT4Q8WW24 435 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 HSPH1Q92598 858 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 TBC1D31Q96DN5 1066 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 ALS2CR12Q96Q35 445 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 SIK2Q9H0K1 926 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DHX35Q9H5Z1 703 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 C8orf33Q9H7E9 229 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 LZTFL1Q9NQ48 299 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 DNAJC17Q9NVM6 304 aaKnown RBP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 KLHL11Q9NVR0 708 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PLK2Q9NYY3 685 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 WNT16Q9UBV4 365 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 PYCARDQ9ULZ3 195 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 GUCA1BQ9UMX6 200 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 HYOU1Q9Y4L1 999 aa6.51□□□□□ -1.37
PRKDC-211ENST00000546304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRKDC-211ENST00000546304 FAM72CH0Y354 149 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 EEF2KO00418 725 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ZSCAN12O43309 604 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CREB3O43889 395 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 TULP3O75386 442 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 FBXO24O75426 580 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 PALMO75781 387 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 LUC7L3O95232 432 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 MOCS3O95396 460 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 KRT1P04264 644 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 KRT7P08729 469 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ALADP13716 330 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 GLULP15104 373 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 EPHB2P29323 1055 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 L1CAMP32004 1257 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 HTR7P34969 479 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 OPRD1P41143 372 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 MARCKSL1P49006 195 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF135P52742 658 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 MLLT6P55198 1093 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 AMPD2Q01433 879 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 KRT81Q14533 505 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 LRRC14Q15048 493 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 C5orf22Q49AR2 442 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 SLC44A4Q53GD3 710 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 BOLA3Q53S33 107 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ALFQ53S48 1182 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ERMARDQ5T6L9 678 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 FAM72AQ5TYM5 149 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms