RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 AVPR1AP37288 418 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ACADVLP49748 655 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ANKDD1AQ495B1 522 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 LRRC8EQ6NSJ5 796 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 FSTL5Q8N475 847 aaPredicted RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 ANKFN1Q8N957 763 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 KDM1BQ8NB78 822 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 AGBL3Q8NEM8 1001 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TNIP2Q8NFZ5 429 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TRAPPC12Q8WVT3 735 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 BORCS5Q969J3 196 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ZBED3Q96IU2 234 aaPredicted RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 MAELQ96JY0 434 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 COX4I2Q96KJ9 171 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 GPR22Q99680 433 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 AS3MTQ9HBK9 375 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 CACNA2D2Q9NY47 1150 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 LCTP09848 1927 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 KANSL1LA0AUZ9 987 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 PRORSD1PA6NEY8 169 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ZNF839A8K0R7 811 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 KCNK1O00180 336 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 GIPC1O14908 333 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 DLX3O60479 287 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TFPTP0C1Z6 253 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 RPL10P27635 214 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 CLCN3P51790 818 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 RAB15P59190 212 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 SLC12A1Q13621 1099 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 LRP8Q14114 963 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 CERCAMQ5T4B2 595 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 CHSY3Q70JA7 882 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 STRADAQ7RTN6 431 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ANKRD52Q8NB46 1076 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 ZNF280CQ8ND82 737 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TFAP2CQ92754 450 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TCF12Q99081 682 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 MRPL45Q9BRJ2 306 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 PAIP1Q9H074 479 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 UPF3AQ9H1J1 476 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 CASS4Q9NQ75 786 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 MRGBPQ9NV56 204 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 PRMT7Q9NVM4 692 aaPredicted RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.111e-7■□□□□ 8.7
SRP54-202ENST00000546080 GTSE1Q9NYZ3 720 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 XPR1Q9UBH6 696 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
SRP54-202ENST00000546080 CDC14AQ9UNH5 594 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TRIP11Q15643 1979 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 MYO18AQ92614 2054 aaKnown RBP14.38□□□□□ -0.11
SRP54-202ENST00000546080 RLFQ13129 1914 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 TRIM64CA6NLI5 447 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
SRP54-202ENST00000546080 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 PGGT1BP53609 377 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 PRKCQQ04759 706 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 PPIL2Q13356 520 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 FASTKQ14296 549 aaKnown RBP14.38□□□□□ -0.11
SRP54-202ENST00000546080 SQLEQ14534 574 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 METTL7BQ6UX53 244 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 PELI3Q8N2H9 469 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 MCMBPQ9BTE3 642 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 PFDN4Q9NQP4 134 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 ZNF277Q9NRM2 450 aaPredicted RBP14.38□□□□□ -0.11
SRP54-202ENST00000546080 SARDHQ9UL12 918 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 CDH7Q9ULB5 785 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 WDR37Q9Y2I8 494 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 FIS1Q9Y3D6 152 aa14.38□□□□□ -0.11
SRP54-202ENST00000546080 SAC3D1A6NKF1 404 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 NPHS1O60500 1241 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 SRP72O76094 671 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 SLC35E2BP0CK96 405 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CYP2C8P10632 490 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 EPHX2P34913 555 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 SULT1E1P49888 294 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 PHEXP78562 749 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CTBSQ01459 385 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 LY6KQ17RY6 165 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 AGKQ53H12 422 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 SAMD4BQ5PRF9 694 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 DHFR2Q86XF0 187 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 FLAD1Q8NFF5 587 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CHRAC1Q9NRG0 131 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 NSMCE4AQ9NXX6 385 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 HACD3Q9P035 362 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CCDC167Q9P0B6 97 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 MAGEB16A2A368 324 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 FBP2O00757 339 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms