RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 UBAP1Q9NZ09 502 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 RNF181Q9P0P0 153 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 TRHDEQ9UKU6 1024 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 AURKAO14965 403 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 NCAM2O15394 837 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 DDHD2O94830 711 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
LDLR-204ENST00000545707 PPARGP37231 505 aaPredicted RBP16.03■□□□□ 0.16
LDLR-204ENST00000545707 ARL13BQ3SXY8 428 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 TSTD2Q5T7W7 516 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 LRRC8EQ6NSJ5 796 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 C3orf58Q8NDZ4 430 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 BHLHE22Q8NFJ8 381 aaPredicted RBP16.03■□□□□ 0.16
LDLR-204ENST00000545707 STYXQ8WUJ0 223 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 ZFAND2BQ8WV99 257 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 TSNARE1Q96NA8 513 aa16.03■□□□□ 0.16
LDLR-204ENST00000545707 SBF1O95248 1867 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 C15orf38-AP3S2A0A0A6YYH1 394 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 MBLAC1A4D2B0 266 aaPredicted RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 ERI2A8K979 691 aaKnown RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CABYRO75952 493 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CSRP3P50461 194 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CLCNKBP51801 687 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CHN2P52757 468 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 RBBP5Q15291 538 aaKnown RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 PIGGQ5H8A4 983 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 BHLHA9Q7RTU4 235 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 GALNT4Q8N4A0 578 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 RP9Q8TA86 221 aaKnown RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 LPPQ93052 612 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 EPAS1Q99814 870 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 DNAI2Q9GZS0 605 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 WDR41Q9HAD4 459 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CLIC5Q9NZA1 410 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 CDYLQ9Y232 598 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 ACOT9Q9Y305 439 aa16.02■□□□□ 0.16
LDLR-204ENST00000545707 COPG1Q9Y678 874 aaKnown RBP16.02■□□□□ 0.16
LDLR-204ENST00000545707 TARM1B6A8C7 271 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 CLGNO14967 610 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 DNAJA2O60884 412 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 PMLP29590 882 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 BEX3Q00994 111 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.15
LDLR-204ENST00000545707 PRKAA1Q13131 559 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 GRM2Q14416 872 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 MFSD10Q14728 455 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 CNGA3Q16281 694 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 NOMO2Q5JPE7 1267 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 C16orf89Q6UX73 402 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 PTAR1Q7Z6K3 402 aaPredicted RBP16.02■□□□□ 0.15
LDLR-204ENST00000545707 TAC4Q86UU9 113 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 RNF135Q8IUD6 432 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 DPF3Q92784 378 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 CNDP1Q96KN2 507 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 FICDQ9BVA6 458 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 KIFC1Q9BW19 673 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 CYP4F12Q9HCS2 524 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 TBC1D30Q9Y2I9 924 aa16.02■□□□□ 0.15
LDLR-204ENST00000545707 RALGAPA2Q2PPJ7 1873 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 FAM95CA0A1B0GW59 222 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 C9IYK1 514 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 F2P00734 622 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 SPATA31D3P0C874 917 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 HDCP19113 662 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 ARNTP27540 789 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 CHRNA4P43681 627 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 HCAR3P49019 387 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 GJA9P57773 515 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 ART3Q13508 389 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 PRPSAP1Q14558 356 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 SH2D4BQ5SQS7 431 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 NAPEPLDQ6IQ20 393 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 GK5Q6ZS86 529 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 SPATA31D4Q6ZUB0 917 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 LRGUKQ96M69 825 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 GPR78Q96P69 363 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 PPP1R10Q96QC0 940 aaKnown RBP16.01■□□□□ 0.15
LDLR-204ENST00000545707 GAD1Q99259 594 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 SERPINI1Q99574 410 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 CNGB3Q9NQW8 809 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 NDFIP2Q9NV92 336 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 MIOSQ9NXC5 875 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 BRCA2P51587 3418 aa16.01■□□□□ 0.15
LDLR-204ENST00000545707 HHLA1C9JL84 531 aa16■□□□□ 0.15
LDLR-204ENST00000545707 H2AFYO75367 372 aaKnown RBP16■□□□□ 0.15
LDLR-204ENST00000545707 PMPCBO75439 489 aa16■□□□□ 0.15
LDLR-204ENST00000545707 CALRP27797 417 aaKnown RBP16■□□□□ 0.15
LDLR-204ENST00000545707 AXLP30530 894 aa16■□□□□ 0.15
LDLR-204ENST00000545707 TAS2R39P59534 338 aa16■□□□□ 0.15
LDLR-204ENST00000545707 FRG1Q14331 258 aaKnown RBP16■□□□□ 0.15
LDLR-204ENST00000545707 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms