RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ZFR2Q9UPR6 939 aaKnown RBP21.54■■□□□ 1.04
SCARB1-210ENST00000545493 SIGLEC16A6NMB1 481 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 SRRM3A6NNA2 597 aaPredicted RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 PRAMEF26H0Y7S4 382 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 ITGAVP06756 1048 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 PLEKP08567 350 aaPredicted RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 RECQLP46063 649 aaPredicted RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 RXRGP48443 463 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 ARRB1P49407 418 aaPredicted RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 RPL7AP62424 266 aaKnown RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 ZNF284Q2VY69 593 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 SFMBT2Q5VUG0 894 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 SEL1L3Q68CR1 1132 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 PARS2Q7L3T8 475 aaKnown RBP21.53■■□□□ 1.04
SCARB1-210ENST00000545493 KANSL1Q7Z3B3 1105 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 HORMAD1Q86X24 394 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 MARCH9Q86YJ5 346 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 PYROXD2Q8N2H3 581 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 OXR1Q8N573 874 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 BAP1Q92560 729 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 PPP1R16AQ96I34 528 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 TAS2R14Q9NYV8 317 aa21.53■■□□□ 1.04
SCARB1-210ENST00000545493 CXorf51AA0A1B0GTR3 108 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 RAMP2O60895 175 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 FERP16591 822 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 ITGB7P26010 798 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 ETFBP38117 255 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 NEK3P51956 506 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 ZNF143P52747 638 aaPredicted RBP21.52■■□□□ 1.04
SCARB1-210ENST00000545493 SLC20A2Q08357 652 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 OVGP1Q12889 678 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 BNIP3Q12983 259 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 TMEM259Q4ZIN3 620 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 CARD16Q5EG05 197 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 NEK5Q6P3R8 708 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 BPIFA3Q9BQP9 254 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 HEPHQ9BQS7 1158 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 RETREG1Q9H6L5 497 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 ZDHHC6Q9H6R6 413 aa21.52■■□□□ 1.04
SCARB1-210ENST00000545493 DSPP15924 2871 aaKnown RBP21.52■■□□□ 1.04
SCARB1-210ENST00000545493 TAF4O00268 1085 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 SLC31A1O15431 190 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 ADRB3P13945 408 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 GKP32189 559 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 DNA2P51530 1060 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 OGDHQ02218 1023 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 DNAJC3Q13217 504 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 STAT4Q14765 748 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 GCNT7Q6ZNI0 430 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 IRF2BP2Q7Z5L9 587 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 PROSER1Q86XN7 944 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 MCOLN2Q8IZK6 566 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 OR6K2Q8NGY2 324 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 CNDP2Q96KP4 475 aaKnown RBP21.51■■□□□ 1.03
SCARB1-210ENST00000545493 MAGEH1Q9H213 219 aa21.51■■□□□ 1.03
SCARB1-210ENST00000545493 NOL6Q9H6R4 1146 aaKnown RBP21.51■■□□□ 1.03
SCARB1-210ENST00000545493 ENC1O14682 589 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 MAGEC1O60732 1142 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 THEGLP0DJG4 465 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 HNRNPA2B1P22626 353 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 ABL2P42684 1182 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 SMAD1Q15797 465 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 CCDC157Q569K6 752 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 EFHC2Q5JST6 749 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 E4F1Q66K89 784 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 DHRS13Q6UX07 377 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 LEKR1Q6ZMV7 388 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 SLFN11Q7Z7L1 901 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 EID2Q8N6I1 236 aa21.5■■□□□ 1.03
SCARB1-210ENST00000545493 RTL3Q8N8U3 475 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 ISG20Q96AZ6 181 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 RTN4Q9NQC3 1192 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 HECAQ9UBI9 543 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 RALYQ9UKM9 306 aaKnown RBP21.5■■□□□ 1.03
SCARB1-210ENST00000545493 ANKRD11Q6UB99 2663 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-210ENST00000545493 LRRC53A6NM62 1247 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 ATMINO43313 823 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-210ENST00000545493 SDC3O75056 442 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 PCDH8O95206 1070 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 GSRP00390 522 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 L1CAMP32004 1257 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 ACADVLP49748 655 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 CCDC15Q0P6D6 951 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 FGL2Q14314 439 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 ACAD10Q6JQN1 1059 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 SLC22A18ASQ8N1D0 253 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 OR13H1Q8NG92 308 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 NAT10Q9H0A0 1025 aaKnown RBP21.49■■□□□ 1.03
SCARB1-210ENST00000545493 CAAP1Q9H8G2 361 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 FZD10Q9ULW2 581 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 MYO6Q9UM54 1294 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 FADS3Q9Y5Q0 445 aa21.49■■□□□ 1.03
SCARB1-210ENST00000545493 ITPR1Q14643 2758 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 TRPM6Q9BX84 2022 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 FAM149AA5PLN7 773 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 SPINT1O43278 529 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 LDOC1O95751 146 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-210ENST00000545493 EPHB2P29323 1055 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 AKT2P31751 481 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 GEMIN4P57678 1058 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms