RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 TMEM270Q6UE05 265 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 PHACTR4Q8IZ21 702 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 ATP6V0D2Q8N8Y2 350 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 ZNF564Q8TBZ8 553 aaPredicted RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 KAT5Q92993 513 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 DYRK4Q9NR20 520 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 SPASTQ9UBP0 616 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 APOBEC3BQ9UH17 382 aaKnown RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 LOXL2Q9Y4K0 774 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 FADS3Q9Y5Q0 445 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 WASF2Q9Y6W5 498 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 ZFC3H1O60293 1989 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 SCN8AQ9UQD0 1980 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 BLACEA4D250 179 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 IGLON5A6NGN9 336 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 LEFTY1O75610 366 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 PRNPP04156 253 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 ANXA6P08133 673 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 PAEPP09466 180 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 ADRB3P13945 408 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 TSHRP16473 764 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 GPD2P43304 727 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 ME1P48163 572 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 OXCT1P55809 520 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 YWHAEP62258 255 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 RPS21P63220 83 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 CCL7P80098 99 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 SERINC3Q13530 473 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 MORC3Q14149 939 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 TAF5Q15542 800 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 RABGAP1LQ5R372 815 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 TTC39BQ5VTQ0 682 aaPredicted RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 KIAA1161Q6NSJ0 714 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 LINGO4Q6UY18 593 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 DPY19L3Q6ZPD9 716 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 BEND5Q7L4P6 421 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 SDR16C5Q8N3Y7 309 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 ATP11CQ8NB49 1132 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 KYQ8NBH2 561 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 FOXD4L4Q8WXT5 416 aaPredicted RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 GLMNQ92990 594 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 GFM1Q96RP9 751 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 CPEB1Q9BZB8 566 aaKnown RBP9.59□□□□□ -0.87
CHD4-212ENST00000545083 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD4-212ENST00000545083 GULP1Q9UBP9 304 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 GGT7Q9UJ14 662 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 VANGL2Q9ULK5 521 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 PAXBP1Q9Y5B6 917 aa9.59□□□□□ -0.87
CHD4-212ENST00000545083 SYNJ2BP-COX16A0A087WUM0 186 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 C9orf172C9J069 976 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 FPGTO14772 594 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 STX10O60499 249 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 ZNF821O75541 412 aaPredicted RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 CNTN5O94779 1100 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 RHOBTB3O94955 611 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 RPLP0P05388 317 aaKnown RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 NEFLP07196 543 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 JMJD7P0C870 316 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 CCKBRP32239 447 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 ABL2P42684 1182 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 NEK3P51956 506 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 CCDC15Q0P6D6 951 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 AUHQ13825 339 aaKnown RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 TCEA2Q15560 299 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 DCAF17Q5H9S7 520 aaPredicted RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 C22orf39Q6P5X5 142 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 PARS2Q7L3T8 475 aaKnown RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 GUF1Q8N442 669 aaKnown RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 BTN2A2Q8WVV5 523 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 JPH3Q8WXH2 748 aaPredicted RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 RNF34Q969K3 372 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 FEM1CQ96JP0 617 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 LENG8Q96PV6 779 aaPredicted RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 PPP1R9BQ96SB3 815 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 SLC12A9Q9BXP2 914 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 STRADBQ9C0K7 418 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 POPDC2Q9HBU9 364 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 COX16Q9P0S2 106 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 SEPT10Q9P0V9 454 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 SIRPGQ9P1W8 387 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 IL36AQ9UHA7 158 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 ITM2BQ9Y287 266 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 TBC1D30Q9Y2I9 924 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
CHD4-212ENST00000545083 PCDHB4Q9Y5E5 795 aa9.58□□□□□ -0.88
CHD4-212ENST00000545083 HS3ST4Q9Y661 456 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms