RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 EFHBQ8N7U6 833 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 KLHL23Q8NBE8 558 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PCSK9Q8NBP7 692 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 TNIP2Q8NFZ5 429 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RP9Q8TA86 221 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 DLG3Q92796 817 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TUBGCP3Q96CW5 907 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 DTLQ9NZJ0 730 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 ST3GAL5Q9UNP4 418 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SLC45A1Q9Y2W3 748 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CDK5RAP2Q96SN8 1893 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 KPNA4O00629 521 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 BNIP3LO60238 219 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 VPS26AO75436 327 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CDH2P19022 906 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 CLCN5P51795 746 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 GALNTL6Q49A17 601 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 DCLRE1AQ6PJP8 1040 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CMC1Q7Z7K0 106 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TNS4Q8IZW8 715 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 UBR7Q8N806 425 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RAET1EQ8TD07 263 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CYGBQ8WWM9 190 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 MRPL57Q9BQC6 102 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 VRTNQ9H8Y1 702 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 COG4Q9H9E3 785 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SYTL2Q9HCH5 934 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PTPRHQ9HD43 1115 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PKP3Q9Y446 797 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 NCF1BA6NI72 391 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 NCF1CA8MVU1 366 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 RAMP2O60895 175 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 VPS4BO75351 444 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TM7SF2O76062 418 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 METTL18O95568 372 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 NCF1P14598 390 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 NFKBIAP25963 317 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 ADRA1BP35368 520 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 LIMK2P53671 638 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 POU4F1Q01851 419 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 GRIK3Q13003 919 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 POLD3Q15054 466 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 NFE2Q16621 373 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 FAM110CQ1W6H9 321 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 AGKQ53H12 422 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 BRMS1LQ5PSV4 323 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 FAM45BPQ6NSW5 357 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 ZYG11AQ6WRX3 759 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PQLC3Q8N755 202 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 BHLHE22Q8NFJ8 381 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 FAM45AQ8TCE6 357 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SLC35F5Q8WV83 523 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 MARK4Q96L34 752 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 ASB2Q96Q27 587 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CDRT15Q96T59 188 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 DENND2DQ9H6A0 471 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 WDR41Q9HAD4 459 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TXNRD2Q9NNW7 524 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 FAM105AQ9NUU6 356 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 ATAD3AQ9NVI7 634 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SLC8A2Q9UPR5 921 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 KLF11O14901 512 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TBC1D4O60343 1298 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 SEC24DO94855 1032 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 PSMC3P17980 439 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CHRM3P20309 590 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CD86P42081 329 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 NRLP54845 237 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 NME5P56597 212 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RAB14P61106 215 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 GSTA3Q16772 222 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TEX44Q53QW1 395 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PPP1R15BQ5SWA1 713 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RBM15BQ8NDT2 890 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 PHF21BQ96EK2 531 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CNDP1Q96KN2 507 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 CAB39Q9Y376 341 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 SESN1Q9Y6P5 492 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RGSL1A5PLK6 1076 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 TREHO43280 583 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
VPS50-220ENST00000544910 ZMPSTE24O75844 475 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 WDR47O94967 919 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 ME2P23368 584 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 YWHAQP27348 245 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 PIK3R1P27986 724 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 HTR7P34969 479 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 ALDH1A3P47895 512 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 IDH3AP50213 366 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 FKBP1BP68106 108 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 CDK18Q07002 472 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 TSTA3Q13630 321 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms