RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ATICP31939 592 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ARPP19P56211 112 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TTC23LQ6PF05 361 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 NAPRTQ6XQN6 538 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 USP43Q70EL4 1123 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 FAM131BQ86XD5 332 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 GRAMD2AQ8IUY3 354 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 EXD2Q9NVH0 621 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TEX264Q9Y6I9 313 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 NFASCO94856 1347 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 A0A096LPK6 155 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 SLC15A5A6NIM6 579 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 E7ESA3 106 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 APOL1O14791 398 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
PDZD4-209ENST00000544474 MYO1DO94832 1006 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ADGRE1Q14246 886 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
PDZD4-209ENST00000544474 EMC2Q15006 297 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 FXNQ16595 210 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 SIGIRRQ6IA17 410 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 FRA10AC1Q70Z53 315 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CYP2U1Q7Z449 544 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 BNIPLQ7Z465 357 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 HTRA1Q92743 480 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CHST12Q9NRB3 414 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ARHGAP28Q9P2N2 729 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TLL2Q9Y6L7 1015 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 NRP2O60462 931 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ATE1O95260 518 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 VAPBO95292 243 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 NR3C2P08235 984 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 LCP1P13796 627 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TSHRP16473 764 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CCND2P30279 289 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 DGCR6Q14129 220 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TFDP2Q14188 446 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 RPS6KA2Q15349 733 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 KBTBD6Q86V97 674 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ARFGAP1Q8N6T3 406 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 FAM151AQ8WW52 585 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 LPGAT1Q92604 370 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 CERS2Q96G23 380 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 RPAP3Q9H6T3 665 aaPredicted RBP13□□□□□ -0.33
PDZD4-209ENST00000544474 PLIN3O60664 434 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ALDOAP04075 364 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ERBB2P04626 1255 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 FGF3P11487 239 aaPredicted RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 TPTEP56180 551 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 YWHAEP62258 255 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 IFRD2Q12894 506 aaPredicted RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 IMPG1Q17R60 797 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 SEL1L3Q68CR1 1132 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 PIWIL3Q7Z3Z3 882 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 PYROXD2Q8N2H3 581 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 RSAD1Q9HA92 442 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 HACD3Q9P035 362 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 CSADQ9Y600 493 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 MKI67P46013 3256 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 DDHD2O94830 711 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 UBL4AP11441 157 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 SEPHS1P49903 392 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 KCNC4Q03721 635 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 USP10Q14694 798 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ARHGAP17Q68EM7 881 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 CCDC81Q6ZN84 652 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ILKAPQ9H0C8 392 aaPredicted RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 PAK5Q9P286 719 aa12.99□□□□□ -0.33
PDZD4-209ENST00000544474 KLHL8Q9P2G9 620 aaPredicted RBP12.99□□□□□ -0.33
PDZD4-209ENST00000544474 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 SLC4A1P02730 911 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 PTPN7P35236 360 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 RAD23AP54725 363 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 ACTR2P61160 394 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 DUOXA2Q1HG44 320 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
PDZD4-209ENST00000544474 JADE1Q6IE81 842 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 C4orf22Q6V702 233 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 CAND1Q86VP6 1230 aaKnown RBP12.98□□□□□ -0.33
PDZD4-209ENST00000544474 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
PDZD4-209ENST00000544474 CADM3Q8N126 398 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 CDH19Q9H159 772 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 POPDC2Q9HBU9 364 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 IARS2Q9NSE4 1012 aaKnown RBP12.98□□□□□ -0.33
PDZD4-209ENST00000544474 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
PDZD4-209ENST00000544474 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms