RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CASS4Q9NQ75 786 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 ABT1Q9ULW3 272 aaKnown RBP16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 SLC45A1Q9Y2W3 748 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 C9JVG2 144 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 G3V2L1 256 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 RTN3O95197 1032 aaPredicted RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 SOX11P35716 441 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 PKNOX1P55347 436 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 DLG1Q12959 904 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 CSHL1Q14406 222 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 LPCAT4Q643R3 524 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 KYAT3Q6YP21 454 aaKnown RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TMEM135Q86UB9 458 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 ITFG2Q969R8 447 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 CPNE1Q99829 537 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TRIM4Q9C037 500 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 DNAI2Q9GZS0 605 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 XPR1Q9UBH6 696 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TLK1Q9UKI8 766 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 hCG_2014768A0A024R1R8 64 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TRAFD1O14545 582 aaPredicted RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 ZCCHC18P0CG32 403 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 MLNP12872 115 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 DSC2Q02487 901 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 SLC10A7Q0GE19 358 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 GALNT2Q10471 571 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 KCTD11Q693B1 232 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 ANO7Q6IWH7 933 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 BNIPLQ7Z465 357 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TRIM74Q86UV6 250 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 TRIM73Q86UV7 250 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 ACE2Q9BYF1 805 aaPredicted RBP16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 DCLRE1BQ9H816 532 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 DCDC2Q9UHG0 476 aa16.01■□□□□ 0.15
SNRNP70-203ENST00000544278 KLF11O14901 512 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 GRIA4P48058 902 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 RAB41Q5JT25 222 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 SPANXN3Q5MJ09 141 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 TRIM42Q8IWZ5 723 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 OR6P1Q8NGX9 317 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 CRYL1Q9Y2S2 319 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 TAS2R39P59534 338 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 LRRC74BQ6ZQY2 392 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 FSTL5Q8N475 847 aaPredicted RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 GIPC2Q8TF65 315 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 LMCD1Q9NZU5 365 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 GMIPQ9P107 970 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 ZDHHC2Q9UIJ5 367 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 HS3ST4Q9Y661 456 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 ATP6AP2A0A1C7CYW4 349 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 ATP6AP2O75787 350 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 FBXO21O94952 628 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 MX2P20592 715 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 CD86P42081 329 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 SLC1A2P43004 574 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 SERPINB8P50452 374 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 RTN4RL1Q86UN2 441 aaPredicted RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 SERINC5Q86VE9 423 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 DDX51Q8N8A6 666 aaKnown RBP eCLIP16■□□□□ 0.153e-7■□□□□ 9.3
SNRNP70-203ENST00000544278 LENG8Q96PV6 779 aaPredicted RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 TLE6Q9H808 572 aa16■□□□□ 0.15
SNRNP70-203ENST00000544278 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
SNRNP70-203ENST00000544278 IRAK2O43187 625 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 TSPAN3O60637 253 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 SBK3P0C264 359 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 KCNA5P22460 613 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 ARNTP27540 789 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 SCNN1AP37088 669 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 NME5P56597 212 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 CDH17Q12864 832 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 WASHC2DQ5SRD0 308 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 GRTP1Q5TC63 336 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 PIM3Q86V86 326 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 TMPRSS6Q8IU80 811 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 HDAC11Q96DB2 347 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 SEPT5Q99719 369 aaPredicted RBP15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 TBL1YQ9BQ87 522 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 IPO11Q9UI26 975 aaKnown RBP15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 PDCD11Q14690 1871 aaKnown RBP15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 MAFKO60675 156 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 FESP07332 822 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 SERPINA6P08185 405 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 PIK3R6Q5UE93 754 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 ARCQ7LC44 396 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 ZC3HC1Q86WB0 502 aaKnown RBP15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 PSMG2Q969U7 264 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 TNFRSF12AQ9NP84 129 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 GTSE1Q9NYZ3 720 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 TET1Q8NFU7 2136 aa15.99■□□□□ 0.15
SNRNP70-203ENST00000544278 A6NHS1 94 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms