RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF764Q96H86 408 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 RITA1Q96K30 269 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 POLG2Q9UHN1 485 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 VPS28Q9UK41 221 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CORO1CQ9ULV4 474 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SPATA31A5Q5VU36 1347 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SPATA31A6Q5VVP1 1343 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SPATA31A7Q8IWB4 1347 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TCOF1Q13428 1488 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PLEKHH2Q8IVE3 1493 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 A0A1W2PQM1 296 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 BTBD19C9JJ37 291 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TACC1O75410 805 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 GJB3O75712 270 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 LAMP2P13473 410 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 COX7A2P14406 83 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 AKR1A1P14550 325 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ABCD1P33897 745 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ACTN2P35609 894 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ARL3P36405 182 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 HADHAP40939 763 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CPA2P48052 419 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CLNS1AP54105 237 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 MTA1Q13330 715 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 MAMLD1Q13495 774 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 AKNAD1Q5T1N1 836 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM81Q6P7N7 255 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 MOB3CQ70IA8 216 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 IKBIPQ70UQ0 350 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CPXM2Q8N436 756 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 OR52N4Q8NGI2 321 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 NEU4Q8WWR8 484 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PIGKQ92643 395 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 KLK15Q9H2R5 256 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TOR3AQ9H497 397 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CXorf56Q9H5V9 222 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 DIAPH3Q9NSV4 1193 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ADD3Q9UEY8 706 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PTPRTO14522 1441 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 NPATQ14207 1427 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ZC3H13Q5T200 1668 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 EMSYQ7Z589 1322 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CCDC141Q6ZP82 1450 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 MTUS2Q5JR59 1369 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CCNB3Q8WWL7 1395 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 POC1B-GALNT4F8VUJ3 575 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 STRNO43815 780 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 USP12O75317 370 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 SCGB1D1O95968 90 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ADAP00813 363 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 GALTP07902 379 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 EDN2P20800 178 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PBX3P40426 434 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 RAD52P43351 418 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CTCFP49711 727 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 YPEL5P62699 121 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM115Q12893 351 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ZNF362Q5T0B9 420 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM63BQ5T3F8 832 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 RBM44Q6ZP01 1051 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 NEK8Q86SG6 692 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 C16orf71Q8IYS4 520 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 OR8H2Q8N162 312 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PAQR4Q8N4S7 273 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 TTC39CQ8N584 583 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 ARL14EPQ8N8R7 260 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PNLDC1Q8NA58 520 aaKnown RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 DNAAF1Q8NEP3 725 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 KAT2AQ92830 837 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 P2RY11Q96G91 374 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 SERINC2Q96SA4 455 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 GLIS2Q9BZE0 524 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 FTOQ9C0B1 505 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 PRKRIP1Q9H875 184 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-207ENST00000544052 MPP6Q9NZW5 540 aa3.98□□□□□ -1.77
SCFD1-207ENST00000544052 CNTLNQ9NXG0 1405 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 SPAG9O60271 1321 aaKnown RBP3.97□□□□□ -1.77
SCFD1-207ENST00000544052 LRRC9Q6ZRR7 1453 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 EIF2AK4Q9P2K8 1649 aaKnown RBP3.97□□□□□ -1.77
SCFD1-207ENST00000544052 KDM5DQ9BY66 1539 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 C17orf113A0A1B0GUU1 675 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 SLC22A23A1A5C7 686 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 OR6C68A6NDL8 312 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 CYP2A6P11509 494 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-207ENST00000544052 RARGP13631 454 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 TNFRSF1AP19438 455 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 NFKBIAP25963 317 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 HOXA7P31268 230 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-207ENST00000544052 PTH2RP49190 550 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 ZXDAP98168 799 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM119Q4V9L6 283 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 KLHL24Q6TFL4 600 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 KRBA2Q6ZNG9 492 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 ENOSF1Q7L5Y1 443 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 GALNT5Q7Z7M9 940 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 UBR1Q8IWV7 1749 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 VPS8Q8N3P4 1428 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms