RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 KLHL2O95198 593 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 VAPBO95292 243 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 CPOXP36551 454 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 USP4Q13107 963 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 POTEHQ6S545 545 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 DENND6AQ8IWF6 608 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 NUP93Q8N1F7 819 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 RNF217Q8TC41 542 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 FAM161BQ96MY7 647 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 GATA5Q9BWX5 397 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 FTHL17Q9BXU8 183 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 OXSMQ9NWU1 459 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 CPSF2Q9P2I0 782 aaKnown RBP16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 TLR6Q9Y2C9 796 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 ANKRD6Q9Y2G4 727 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 TCAF1Q9Y4C2 921 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
SCNN1A-221ENST00000543768 PHGDHO43175 533 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 PMPCBO75439 489 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TM7SF2O76062 418 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 PEX11BO96011 259 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 SLC35E2BP0CK96 405 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 MYL4P12829 197 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 USP46P62068 366 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 CTBP1Q13363 440 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 USP10Q14694 798 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 NOMO2Q5JPE7 1267 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 AP1ARQ63HQ0 302 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 MSANTD2Q6P1R3 559 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 RAPH1Q70E73 1250 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ZNF683Q8IZ20 524 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 CFAP61Q8NHU2 1237 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ANKRD27Q96NW4 1050 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 CDH19Q9H159 772 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 SLC2A6Q9UGQ3 507 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TK2O00142 265 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 PSMG1O95456 288 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 SAT1P21673 171 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 GRK4P32298 578 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 OR1G1P47890 313 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ACLYP53396 1101 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 FAM189BP81408 668 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 MPP1Q00013 466 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 RCN1Q15293 331 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 LRRC49Q8IUZ0 686 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 SCUBE1Q8IWY4 988 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 PPHLN1Q8NEY8 458 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 PTCD2Q8WV60 388 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 FUBP3Q96I24 572 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 CLPTM1LQ96KA5 538 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 C8orf48Q96LL4 319 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ACE2Q9BYF1 805 aaPredicted RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ATXN3LQ9H3M9 355 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 COG4Q9H9E3 785 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 MRM3Q9HC36 420 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TBC1D13Q9NVG8 400 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 TLK1Q9UKI8 766 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
SCNN1A-221ENST00000543768 ANKRD33BA6NCL7 494 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 HSPA4LO95757 839 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 BLMHQ13867 455 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 CNGA3Q16281 694 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 EPGNQ6UW88 154 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 SLC41A1Q8IVJ1 513 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 MFSD6LQ8IWD5 586 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 CENPLQ8N0S6 344 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 MOCOSQ96EN8 888 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 PPP1R2P1Q96PQ5 205 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 THTPAQ9BU02 230 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 PRG3Q9Y2Y8 225 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 APOA4P06727 396 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 AVPR1AP37288 418 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 CHRNA4P43681 627 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 THOC5Q13769 683 aaKnown RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 KDELC2Q7Z4H8 507 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 ULK2Q8IYT8 1036 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 UMODL1-AS1Q8N2C9 162 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 MAPK15Q8TD08 544 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 FSD1LQ9BXM9 530 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
SCNN1A-221ENST00000543768 TARM1B6A8C7 271 aa16.29■□□□□ 0.2
SCNN1A-221ENST00000543768 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
SCNN1A-221ENST00000543768 TBX4P57082 545 aa16.29■□□□□ 0.2
SCNN1A-221ENST00000543768 SLC12A1Q13621 1099 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms