RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SRRM3A6NNA2 597 aaPredicted RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 TSPAN3O60637 253 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 XYLBO75191 536 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 COQ9O75208 318 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 CSPG5O95196 566 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 MT-CYBP00156 380 aaPredicted RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 POLBP06746 335 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 INHBAP08476 426 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 EPCAMP16422 314 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 CCR2P41597 374 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 OXCT1P55809 520 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SHHQ15465 462 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SLC14A2Q15849 920 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SLC26A11Q86WA9 606 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 IPMKQ8NFU5 416 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 OR7D4Q8NG98 312 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 OR52K2Q8NGK3 314 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 MRGPRX2Q96LB1 330 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 FICDQ9BVA6 458 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 PIH1D1Q9NWS0 290 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 HCFC1R1Q9NWW0 138 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 UBP1Q9NZI7 540 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 CFAP97Q9P2B7 532 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 ZMYM5Q9UJ78 669 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 MYO18AQ92614 2054 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 A0A0D9SEW6 157 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 LEFTY2O00292 366 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 TBL1XO60907 577 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 MOSPD3O75425 235 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 RFPL2O75678 378 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 USP1O94782 785 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 LUC7L3O95232 432 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 MMP2P08253 660 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 CRADDP78560 199 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 NIPAL4Q0D2K0 466 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 ZNF235Q14590 738 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 STXBP5Q5T5C0 1151 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 RNF43Q68DV7 783 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 IL31Q6EBC2 164 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 DENND5AQ6IQ26 1287 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 MARK2Q7KZI7 788 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 TMEM135Q86UB9 458 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SRRM1Q8IYB3 904 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 BBS5Q8N3I7 341 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 PGBD5Q8N414 524 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 FSD1LQ9BXM9 530 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 POLR1EQ9GZS1 481 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 ATP13A1Q9HD20 1204 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SMYD2Q9NRG4 433 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 DNMT3BQ9UBC3 853 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 MCM8Q9UJA3 840 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 SOX13Q9UN79 622 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 YBX2Q9Y2T7 364 aaKnown RBP9.47□□□□□ -0.89
GNE-206ENST00000543356 IKBKGQ9Y6K9 419 aa9.47□□□□□ -0.89
GNE-206ENST00000543356 PAPLNO95428 1278 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 RHOP08100 348 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 BRAFP15056 766 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 GJA1P17302 382 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 KRT15P19012 456 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 SLC18A1P54219 525 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 PRSS36Q5K4E3 855 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 MPP7Q5T2T1 576 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 GPR158Q5T848 1215 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 TRMT10BQ6PF06 316 aaKnown RBP9.46□□□□□ -0.89
GNE-206ENST00000543356 RANBP10Q6VN20 620 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 ARRDC2Q8TBH0 407 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 ZNF483Q8TF39 744 aaPredicted RBP9.46□□□□□ -0.89
GNE-206ENST00000543356 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.89
GNE-206ENST00000543356 APOL2Q9BQE5 337 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 MGME1Q9BQP7 344 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 TRABDQ9H4I3 376 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 TASP1Q9H6P5 420 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 ARNT2Q9HBZ2 717 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 MRM3Q9HC36 420 aaKnown RBP9.46□□□□□ -0.89
GNE-206ENST00000543356 UBA2Q9UBT2 640 aaPredicted RBP9.46□□□□□ -0.89
GNE-206ENST00000543356 SEPT3Q9UH03 358 aa9.46□□□□□ -0.89
GNE-206ENST00000543356 MYLKQ15746 1914 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 E2F8A0AVK6 867 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 TMEM120BA0PK00 339 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 CXorf49A8MYA2 514 aaPredicted RBP9.46□□□□□ -0.9
GNE-206ENST00000543356 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.9
GNE-206ENST00000543356 FAM155BO75949 473 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 CHN1P15882 459 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 LSP1P33241 339 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 CD86P42081 329 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 LIG3P49916 1009 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 WNT3AP56704 352 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms