RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SEPT11Q9NVA2 429 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GDE1Q9NZC3 331 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 AIPL1Q9NZN9 384 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NFKBIL1Q9UBC1 381 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PPARGC1AQ9UBK2 798 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GRHPRQ9UBQ7 328 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NOCTQ9UK39 431 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CDH7Q9ULB5 785 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SCML2Q9UQR0 700 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PCDHA9Q9Y5H5 950 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF840PA6NDX5 716 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GOLGA6L3A6NEY3 463 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 C2CD4DB7Z1M9 353 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CBX4O00257 560 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GFRA2O00451 464 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TNFRSF10CO14798 259 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MOSPD3O75425 235 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 LSM8O95777 96 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 DNTTP04053 509 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GYPCP04921 128 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CKMT1AP12532 417 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 LAMP2P13473 410 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 AVPR1AP37288 418 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 COPAP53621 1224 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ETF1P62495 437 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PDCLQ13371 301 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ACAP2Q15057 778 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NUGGCQ68CJ6 796 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TXNDC8Q6A555 127 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CDPF1Q6NVV7 123 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TMCO3Q6UWJ1 677 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TRIM72Q6ZMU5 477 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 IRF2BP2Q7Z5L9 587 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TMEM150AQ86TG1 271 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TADA2BQ86TJ2 420 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MON1AQ86VX9 555 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NRSN1Q8IZ57 195 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ARHGAP18Q8N392 663 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MAB21L3Q8N8X9 362 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SLC30A5Q8TAD4 765 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 BTN2A2Q8WVV5 523 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SYN2Q92777 582 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 PPP1R13BQ96KQ4 1090 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MAGEB10Q96LZ2 347 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MYADMQ96S97 322 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 AGPAT1Q99943 283 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 LRFN3Q9BTN0 628 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NACA2Q9H009 215 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 MIS12Q9H081 205 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 HAUS4Q9H6D7 363 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 TASP1Q9H6P5 420 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 SSU72Q9NP77 194 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ZFP64Q9NPA5 681 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 CNGB3Q9NQW8 809 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 ZNHIT6Q9NWK9 470 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NKIRAS2Q9NYR9 191 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 IL37Q9NZH6 218 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 EPS15L1Q9UBC2 864 aa5.3□□□□□ -1.56
CLIP1-217ENST00000543205 BZW2Q9Y6E2 419 aaKnown RBP5.3□□□□□ -1.56
CLIP1-217ENST00000543205 NCANO14594 1321 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 TRAV19A0A0A6YYK7 116 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 FAM92AA1XBS5 289 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 KLHL33A6NCF5 533 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 AKR1B15C9JRZ8 316 aaPredicted RBP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ADCY5O95622 1261 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 SERPING1P05155 500 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 DHRS4L1P0CG22 281 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 RALAP11233 206 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 SKILP12757 684 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 CHRNB2P17787 502 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 HDCP19113 662 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 CTNNA1P35221 906 aaKnown RBP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 NSFP46459 744 aaKnown RBP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ADKP55263 362 aaKnown RBP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 YWHAGP61981 247 aaKnown RBP eCLIP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 KRT83P78385 493 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 FMO1Q01740 532 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ZP2Q05996 745 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 TDRD12Q587J7 1177 aaKnown RBP5.29□□□□□ -1.56
CLIP1-217ENST00000543205 HECTD3Q5T447 861 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ARTNQ5T4W7 220 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 STXBP5Q5T5C0 1151 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ZBTB37Q5TC79 503 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 NAA35Q5VZE5 725 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 BTBD8Q5XKL5 378 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 FAM205BPQ63HN1 556 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 PM20D1Q6GTS8 502 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 MTSS1LQ765P7 747 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 CCDC186Q7Z3E2 898 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 TMEM110Q86TL2 294 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 VPS36Q86VN1 386 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ERICH1Q86X53 443 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 CNGA4Q8IV77 575 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 ZDHHC14Q8IZN3 488 aa5.29□□□□□ -1.56
CLIP1-217ENST00000543205 CMTM8Q8IZV2 173 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms