RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 AP3D1O14617 1153 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 DGKAP23743 735 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 SP8Q8IXZ3 490 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 AKAP8O43823 692 aaKnown RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 ARFIP1P53367 373 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 PPIL2Q13356 520 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 TMPRSS11AQ6ZMR5 421 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 ZNF571Q7Z3V5 609 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 CREG2Q8IUH2 290 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 MCOLN2Q8IZK6 566 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 UBA3Q8TBC4 463 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 HGH1Q9BTY7 390 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 TPP1O14773 563 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 COX7A2P14406 83 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 OMPP47874 163 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 ALDH9A1P49189 494 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 MAPKAPK3Q16644 382 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 FAM129BQ96TA1 746 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 FAM126AQ9BYI3 521 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 TRNAU1APQ9NX07 287 aaKnown RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 GGA3Q9NZ52 723 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 PTTG2Q9NZH5 202 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 ENO2P09104 434 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 CDK9P50750 372 aaKnown RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 NFE2Q16621 373 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 HOPXQ9BPY8 73 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-215ENST00000543185 VPS28Q9UK41 221 aa19.57■□□□□ 0.72
HDAC4-215ENST00000543185 ZNF268Q14587 947 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 GIN1Q9NXP7 522 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 AXIN1O15169 862 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ARF5P84085 180 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 AMPD2Q01433 879 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ZNHIT3Q15649 155 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 NKAPQ8N5F7 415 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 TMEM176AQ96HP8 235 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 NDUFB5O43674 189 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 LRG1P02750 347 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 CACNA1CQ13936 2221 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 AP4B1Q9Y6B7 739 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 CAMKK1Q8N5S9 505 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ADCY4Q8NFM4 1077 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ETNPPLQ8TBG4 499 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 TRMOQ9BU70 441 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 RUSC1Q9BVN2 902 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 TLR8Q9NR97 1041 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 CISHQ9NSE2 258 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 MKLN1Q9UL63 735 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PEX16Q9Y5Y5 336 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PRMT5O14744 637 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ORC5O43913 435 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 MGAT5BQ3V5L5 792 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 ZNF484Q5JVG2 852 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 IFNGP01579 166 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 HHIPL2Q6UWX4 724 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 NOL11Q9H8H0 719 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 NECTIN3Q9NQS3 549 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 IFT80Q9P2H3 777 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 TPD52L2O43399 206 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PRKG2Q13237 762 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PLCL1Q15111 1095 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 MPZL3Q6UWV2 235 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 RAB2BQ8WUD1 216 aa19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PTCD2Q8WV60 388 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
HDAC4-215ENST00000543185 SGPL1O95470 568 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 REXO5Q96IC2 774 aaKnown RBP19.55■□□□□ 0.72
HDAC4-215ENST00000543185 LACRTQ9GZZ8 138 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 OR6A2O95222 327 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 CYP2A6P11509 494 aaPredicted RBP19.55■□□□□ 0.72
HDAC4-215ENST00000543185 TTPAP49638 278 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 ACTR3P61158 418 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 C12orf66Q96MD2 445 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 SPP2Q13103 211 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 CYP2A13Q16696 494 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 LCN1P1Q5VSP4 162 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 BTN3A2P78410 334 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 EPHA10Q5JZY3 1008 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 FAXCQ5TGI0 409 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 CAPN10Q9HC96 672 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 SAE1Q9UBE0 346 aaPredicted RBP19.55■□□□□ 0.72
HDAC4-215ENST00000543185 WDR37Q9Y2I8 494 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
HDAC4-215ENST00000543185 ZBTB14O43829 449 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 ALDH3A2P51648 485 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 EIF5AP63241 154 aaKnown RBP19.55■□□□□ 0.72
HDAC4-215ENST00000543185 ACSM2AQ08AH3 577 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 CBWD3Q5JTY5 395 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 CBWD5Q5RIA9 395 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 ACSM2BQ68CK6 577 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 NWD1Q149M9 1564 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 IFNA7P01567 189 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 PSME3P61289 254 aa19.55■□□□□ 0.72
HDAC4-215ENST00000543185 GLT6D1Q7Z4J2 308 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms