RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 SLC2A13Q96QE2 648 aa7.9□□□□□ -1.15
LRP6-206ENST00000543091 SPHK2Q9NRA0 654 aa7.9□□□□□ -1.15
LRP6-206ENST00000543091 LOXHD1Q8IVV2 1947 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 C1orf232A0A0U1RR37 186 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 H3BMM5 538 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 HSPA4LO95757 839 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 PGAM1P18669 254 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CSKP41240 450 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 WNT3AP56704 352 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 MAXP61244 160 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 GBE1Q04446 702 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ASTE1Q2TB18 679 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 SPANXN3Q5MJ09 141 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 PDPK2PQ6A1A2 396 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CIR1Q86X95 450 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 DEFB123Q8N688 67 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 DNAJC5GQ8N7S2 189 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 VN1R2Q8NFZ6 395 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 P2RY13Q9BPV8 354 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ROPN1BQ9BZX4 212 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 CWH43Q9H720 699 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ROPN1Q9HAT0 212 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 RXFP1Q9HBX9 757 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 EVLQ9UI08 416 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 HS3ST4Q9Y661 456 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 HIDE1A8MVS5 230 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CACNB4O00305 520 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 BEST1O76090 585 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TPH1P17752 444 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 LPOP22079 712 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 ATP1A2P50993 1020 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 MAP7Q14244 749 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 EIF4HQ15056 248 aaKnown RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 DLG2Q15700 870 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 FAM83EQ2M2I3 478 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 POM121L1PQ3SYA9 428 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 MSANTD2Q6P1R3 559 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 KLHDC10Q6PID8 442 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 RD3Q7Z3Z2 195 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TMEM139Q8IV31 216 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 PHACTR4Q8IZ21 702 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 PYROXD2Q8N2H3 581 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ALLCQ8N6M5 410 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CCNYL1Q8N7R7 359 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ARHGEF2Q92974 986 aaKnown RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 TTC17Q96AE7 1141 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TMEM159Q96B96 161 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 HMCESQ96FZ2 354 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 NELL2Q99435 816 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CAPS2Q9BXY5 557 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TRABDQ9H4I3 376 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TMPRSS4Q9NRS4 437 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 LNPEPQ9UIQ6 1025 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 SLC39A10Q9ULF5 831 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 NDST3O95803 873 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 VSNL1P62760 191 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 NTHL1P78549 312 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ITGA9Q13797 1035 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 RAET1GQ6H3X3 334 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 LINGO4Q6UY18 593 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 FAM124AQ86V42 546 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 MYO1HQ8N1T3 1032 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 PCDH20Q8N6Y1 951 aaKnown RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 FBF1Q8TES7 1133 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ERLEC1Q96DZ1 483 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 C1orf74Q96LT6 269 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 QKIQ96PU8 341 aaKnown RBP eCLIP7.89□□□□□ -1.158e-7■■■■□ 21.8
LRP6-206ENST00000543091 SLC25A51Q9H1U9 297 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 ETNK1Q9HBU6 452 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.89□□□□□ -1.15
LRP6-206ENST00000543091 KLHL14Q9P2G3 628 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 IGSF9Q9P2J2 1179 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 TBC1D30Q9Y2I9 924 aa7.89□□□□□ -1.15
LRP6-206ENST00000543091 BCLAF3A2AJT9 711 aaKnown RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 TMCC1O94876 653 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 RPN2P04844 631 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 APOA4P06727 396 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 MGAT1P26572 445 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 PHEXP78562 749 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 POTEHQ6S545 545 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 PTAR1Q7Z6K3 402 aaPredicted RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 SRLQ86TD4 932 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 SCML4Q8N228 414 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 DCAF4L2Q8NA75 395 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 CMASQ8NFW8 434 aaPredicted RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 FBXO25Q8TCJ0 367 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 SLC13A1Q9BZW2 595 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 SMG9Q9H0W8 520 aaKnown RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 FAM96AQ9H5X1 160 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 PHPT1Q9NRX4 125 aaPredicted RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 IARS2Q9NSE4 1012 aaKnown RBP7.88□□□□□ -1.15
LRP6-206ENST00000543091 PCYOX1Q9UHG3 505 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 SNX10Q9Y5X0 201 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 EDDM13A0A1B0GTR0 161 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 TRIM16O95361 564 aa7.88□□□□□ -1.15
LRP6-206ENST00000543091 BRAFP15056 766 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms