RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 ZSCAN30Q86W11 494 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
PTPN6-219ENST00000542848 FAM181AQ8N9Y4 354 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 MSANTD4Q8NCY6 345 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 TUBGCP2Q9BSJ2 902 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 SLC17A9Q9BYT1 436 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 RETREG1Q9H6L5 497 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 USP29Q9HBJ7 922 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 FZD3Q9NPG1 666 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 TMPRSS4Q9NRS4 437 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 NLGN3Q9NZ94 848 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 PPARGC1AQ9UBK2 798 aaKnown RBP12.1□□□□□ -0.47
PTPN6-219ENST00000542848 ZNF212Q9UDV6 495 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
PTPN6-219ENST00000542848 UNC13CQ8NB66 2214 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 SCAMP1O15126 338 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 FFAR2O15552 330 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 AP1G1O43747 822 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 ENDOD1O94919 500 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 GP1BAP07359 652 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 ADRB3P13945 408 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 FLT3P36888 993 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 DUSP3P51452 185 aaPredicted RBP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 CLDN2P57739 230 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 HNRNPKP61978 463 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 GNA12Q03113 381 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 TBC1D25Q3MII6 688 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 CARD16Q5EG05 197 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 CDCP2Q5VXM1 449 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 SLC22A18ASQ8N1D0 253 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 BMFQ96LC9 184 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 APOLD1Q96LR9 279 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 NAA15Q9BXJ9 866 aaKnown RBP12.09□□□□□ -0.47
PTPN6-219ENST00000542848 ATP13A1Q9HD20 1204 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 GPR27Q9NS67 375 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 EVA1BQ9NVM1 165 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 RAI2Q9Y5P3 530 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 FADS3Q9Y5Q0 445 aa12.09□□□□□ -0.47
PTPN6-219ENST00000542848 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 OPA1O60313 960 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 PAK4O96013 591 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 ETFBP38117 255 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 DNA2P51530 1060 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 ARF5P84085 180 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 NRG1Q02297 640 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 TRNP1Q6NT89 227 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 KYAT3Q6YP21 454 aaKnown RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 LSMEM2Q8N112 164 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 RAB7BQ96AH8 199 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 ISG20Q96AZ6 181 aaKnown RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 CFAP57Q96MR6 1250 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 LENG8Q96PV6 779 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-219ENST00000542848 C1QTNF2Q9BXJ5 285 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 STK33Q9BYT3 514 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 DNAJC28Q9NX36 388 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
PTPN6-219ENST00000542848 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 SPTY2D1-AS1A0A0U1RR47 76 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 POM121BA6NF01 834 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 GOLGA8SH3BPF8 625 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 K7ESM1 405 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
PTPN6-219ENST00000542848 TSPAN6O43657 245 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 CD160O95971 181 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 CSF2P04141 144 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 UCHL3P15374 230 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 RABIFP47224 123 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
PTPN6-219ENST00000542848 NOMO3P69849 1222 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 C19orf57Q0VDD7 668 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 SGCGQ13326 291 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 FGL2Q14314 439 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 FZD2Q14332 565 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 ARL13BQ3SXY8 428 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 C2CD6Q53TS8 623 aa12.07□□□□□ -0.48
PTPN6-219ENST00000542848 TAF3Q5VWG9 929 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms