RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ARHGAP42A6NI28 874 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ENO4A6NNW6 628 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 YJEFN3A6XGL0 299 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 HHLA1C9JL84 531 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 AP3B1O00203 1094 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 HAS3O00219 553 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CLDN5O00501 218 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PTGESO14684 152 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 GRID2O43424 1007 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CA12O43570 354 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 DCXO43602 365 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 AP1G1O43747 822 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 FZD6O60353 706 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 RNASEH1O60930 286 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SMIM24O75264 130 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CABYRO75952 493 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PDE5AO76074 875 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SORBS2O94875 1100 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 HSPA4LO95757 839 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 BAG2O95816 211 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 LTFP02788 710 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CAPNS1P04632 268 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 GNAT1P11488 350 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 COL6A2P12110 1019 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ADSLP30566 484 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PEX19P40855 299 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 POLD2P49005 469 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TKTL1P51854 596 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 GTF2A2P52657 109 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 IRF9Q00978 393 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF33AQ06730 810 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 NSUN2Q08J23 767 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ZBTB17Q13105 803 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 MPP3Q13368 585 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ITGA7Q13683 1181 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 GRB14Q14449 540 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 HERC3Q15034 1050 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SNX17Q15036 470 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 DLG2Q15700 870 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC9B1Q4ZJI4 515 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SFT2D3Q587I9 215 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 HSP90AA5PQ58FG0 334 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 OGFRL1Q5TC84 451 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 BSPRYQ5W0U4 402 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ITPRIPL1Q6GPH6 555 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC30A9Q6PML9 568 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ZYG11AQ6WRX3 759 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 BHLHA9Q7RTU4 235 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 MFN1Q8IWA4 741 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CNTN4Q8IWV2 1026 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 DEFB107AQ8IZN7 70 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SIX6OS1Q8N1H7 587 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TDRD5Q8NAT2 981 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ARRDC4Q8NCT1 418 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SMG8Q8ND04 991 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ACVR1CQ8NER5 493 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 STYXQ8WUJ0 223 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM40Q8WWA1 233 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PYDC1Q8WXC3 89 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 NCSTNQ92542 709 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 MFSD3Q96ES6 412 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ABHD8Q96I13 439 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 VPS39Q96JC1 886 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 MAML3Q96JK9 1138 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TEKT5Q96M29 485 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PGLYRP2Q96PD5 576 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 LENG8Q96PV6 779 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 BTBD9Q96Q07 612 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP1R10Q96QC0 940 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 OR52B2Q96RD2 323 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TUBGCP5Q96RT8 1024 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 KCNK16Q96T55 309 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 SMOQ99835 787 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 KIFC1Q9BW19 673 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 ULBP1Q9BZM6 244 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 KLHL4Q9C0H6 718 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 IL22Q9GZX6 179 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM49AQ9H0Q0 323 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 TSPAN10Q9H1Z9 355 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 VCX3BQ9H321 246 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 EBF3Q9H4W6 596 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PIDD1Q9HB75 910 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 NMRAL1Q9HBL8 299 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 GOLGA2P5Q9HBQ8 144 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 LRRC4Q9HBW1 653 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CRTAC1Q9NQ79 661 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 CNGB3Q9NQW8 809 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 NSMCE4AQ9NXX6 385 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 KLK14Q9P0G3 267 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 PRPF19Q9UMS4 504 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 FCF1Q9Y324 198 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 RAP2CQ9Y3L5 183 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 MYO18AQ92614 2054 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 RGSL1A5PLK6 1076 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ERVH48-1M5A8F1 160 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TNFRSF10BO14763 440 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms