RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GOLGA8SH3BPF8 625 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 LRCH4O75427 683 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 CD4P01730 458 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ASGR1P07306 291 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 KRT3P12035 628 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PRKAR2AP13861 404 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 UQCRBP14927 111 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ELNP15502 786 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 IGFBP6P24592 240 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 IL1R2P27930 398 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 LRPAP1P30533 357 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 MAGEA4P43358 317 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 CHN2P52757 468 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GABREP78334 506 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 NOGQ13253 232 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 TRIP10Q15642 601 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 FBXO47Q5MNV8 452 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ZNF618Q5T7W0 954 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ARHGAP17Q68EM7 881 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 DCUN1D2Q6PH85 259 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 CYP4V2Q6ZWL3 525 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GSTA5Q7RTV2 222 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 POLNQ7Z5Q5 900 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 UNC93AQ86WB7 457 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 RBM15BQ8NDT2 890 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 HCAR2Q8TDS4 363 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 HLA-CQ95604 372 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 HEMGNQ9BXL5 484 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 NMUR2Q9GZQ4 415 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ADNPQ9H2P0 1102 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 NDUFA13Q9P0J0 144 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ST3GAL5Q9UNP4 418 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 SMG5Q9UPR3 1016 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ACTL7BQ9Y614 415 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 MYOCOSA0A1B0GUC4 107 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 IDH3BO43837 385 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GUCY1B2O75343 617 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 IVDP26440 423 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PEX2P28328 305 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PCSK6P29122 969 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 RPL34P49207 117 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 KCNA10Q16322 511 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 TAZQ16635 292 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 NADK2Q4G0N4 442 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 IZUMO3Q5VZ72 239 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 RHBDF2Q6PJF5 856 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PAOXQ6QHF9 649 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 MFSD7Q6UXD7 560 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 FAM183BPQ6ZVS7 135 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PDSS2Q86YH6 399 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ULK2Q8IYT8 1036 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 RCOR2Q8IZ40 523 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 EMC1Q8N766 993 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 DTX3Q8N9I9 347 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ANKRD53Q8N9V6 530 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GDPD5Q8WTR4 605 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC35F5Q8WV83 523 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 KHSRPQ92945 711 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■■■■□ 20.4
PDLIM5-221ENST00000542407 CCDC124Q96CT7 223 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GCNAQ96QF7 691 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 GPATCH1Q9BRR8 931 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC4A5Q9BY07 1137 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 PPARGC1AQ9UBK2 798 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 TMEM5Q9Y2B1 443 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 ATP11BQ9Y2G3 1177 aa8.12□□□□□ -1.11
PDLIM5-221ENST00000542407 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 hCG_1818297A0A087WSY0 165 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 C15orf38-AP3S2A0A0A6YYH1 394 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 MEI4A8MW99 385 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 E5RJQ4 531 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 PI4K2BG5E9Z4 385 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 MCF2LO15068 1137 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 ICMTO60725 284 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 MYL2P10916 166 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 VAMP1P23763 118 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 LMO2P25791 158 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 PRKAR1BP31321 381 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 CDKN2BP42772 138 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 MLLT6P55198 1093 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 NAA20P61599 178 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 ITGA9Q13797 1035 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 PTK6Q13882 451 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 IYDQ6PHW0 289 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 SPOCD1Q6ZMY3 1216 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 ARPINQ7Z6K5 226 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 CRYBG2Q8N1P7 616 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 DDHD1Q8NEL9 900 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 ZFP28Q8NHY6 868 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
PDLIM5-221ENST00000542407 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms