RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 MUC3BQ9H195 1237 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PPCSQ9HAB8 311 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PSMC3IPQ9P2W1 217 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 FETUBQ9UGM5 382 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TBC1D30Q9Y2I9 924 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TYW5A2RUC4 315 aaKnown RBP11.19□□□□□ -0.62
SCG3-202ENST00000542355 KDELR3O43731 214 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 FGF19O95750 216 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 GSTA2P09210 222 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 HNRNPA1P09651 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCG3-202ENST00000542355 PRKCHP24723 683 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 HOXD9P28356 352 aaPredicted RBP11.19□□□□□ -0.62
SCG3-202ENST00000542355 HOXA9P31269 272 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 OXCT1P55809 520 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 DSC2Q02487 901 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 NIPAL4Q0D2K0 466 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 CDH17Q12864 832 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 PCSK7Q16549 785 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
SCG3-202ENST00000542355 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 TPGS1Q6ZTW0 290 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
SCG3-202ENST00000542355 CCNJLQ8IV13 435 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 KLHDC8BQ8IXV7 354 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
SCG3-202ENST00000542355 UNC5BQ8IZJ1 945 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 PPM1NQ8N819 430 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 SH3RF2Q8TEC5 729 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 DDI1Q8WTU0 396 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 PPP1R2P1Q96PQ5 205 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 FICDQ9BVA6 458 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 FSD1LQ9BXM9 530 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 PDFQ9HBH1 243 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 ATP13A1Q9HD20 1204 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 SMYD2Q9NRG4 433 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 IKBKGQ9Y6K9 419 aa11.19□□□□□ -0.62
SCG3-202ENST00000542355 CBX4O00257 560 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 C1QAP02745 245 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 PFKLP17858 780 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 PGAM1P18669 254 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 CD86P42081 329 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 NPY2RP49146 381 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 GNGT1P63211 74 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ZNF235Q14590 738 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ARHGAP15Q53QZ3 475 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 TDRD5Q8NAT2 981 aaKnown RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 HJURPQ8NCD3 748 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 DCAKDQ8WVC6 231 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 IMP4Q96G21 291 aaKnown RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 NAT9Q9BTE0 207 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 DHRS4Q9BTZ2 278 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 TLE6Q9H808 572 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 MOCS1Q9NZB8 636 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 DPP7Q9UHL4 492 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ZNF510Q9Y2H8 683 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 RPS6KL1Q9Y6S9 549 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 AP3B1O00203 1094 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 GFRA2O00451 464 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 MUSKO15146 869 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 GJB3O75712 270 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 POLBP06746 335 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 INHBAP08476 426 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 MZF1P28698 734 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 ADRA1AP35348 466 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 MDH1P40925 334 aaKnown RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 WNT3AP56704 352 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 TNK2Q07912 1038 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 MPP3Q13368 585 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 CDH18Q13634 790 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 IHHQ14623 411 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 CRYMQ14894 314 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 RASA2Q15283 850 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 SMAD1Q15797 465 aaKnown RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 TUSC1Q2TAM9 212 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 RANBP10Q6VN20 620 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 LRRC6Q86X45 466 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 SLC44A1Q8WWI5 657 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 FCRL3Q96P31 734 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 KCNK9Q9NPC2 374 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 CHRAC1Q9NRG0 131 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
SCG3-202ENST00000542355 PSD3Q9NYI0 1048 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms