RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 AKAP5P24588 427 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 PMLP29590 882 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 CXCR3P49682 368 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 THOP1P52888 689 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MAP3K7CLP57077 242 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 LSAMPQ13449 338 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SQLEQ14534 574 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TMEM259Q4ZIN3 620 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 IRAK1BP1Q5VVH5 260 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 BEND5Q7L4P6 421 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SCML4Q8N228 414 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MAPK15Q8TD08 544 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 RCN3Q96D15 328 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FCRL5Q96RD9 977 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TRMOQ9BU70 441 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 C1QTNF1Q9BXJ1 281 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 NUF2Q9BZD4 464 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CATSPERBQ9H7T0 1116 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FNIP2Q9P278 1114 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 XPR1Q9UBH6 696 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 OR12D3Q9UGF7 316 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 IPO11Q9UI26 975 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 CDH9Q9ULB4 789 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 AP4B1Q9Y6B7 739 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FAM95CA0A1B0GW59 222 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 E2F8A0AVK6 867 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 DYTNA2CJ06 578 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CAPN8A6NHC0 703 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MAP3K13O43283 966 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ADCY6O43306 1168 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 HCRTO43612 131 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ZMPSTE24O75844 475 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 F2P00734 622 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 JCHAINP01591 159 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 RBP1P09455 135 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FAM58BPP0C7Q3 252 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SLC35E2BP0CK96 405 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SMIM10L2AP0DMW4 78 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SMIM10L2BP0DMW5 78 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 HSPA8P11142 646 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 EPHA3P29320 983 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 PSMD8P48556 350 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MRPS22P82650 360 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 GALNT1Q10472 559 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 TRAP1Q12931 704 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 SNX17Q15036 470 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 DLG2Q15700 870 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 RAB41Q5JT25 222 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 AGAP9Q5VTM2 703 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 KIAA0930Q6ICG6 404 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 RNF111Q6ZNA4 994 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SPATA24Q86W54 205 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FSTL5Q8N475 847 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 RNF34Q969K3 372 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 GFM2Q969S9 779 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 ASB9Q96DX5 294 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MAML3Q96JK9 1138 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MAELQ96JY0 434 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 CATSPER2Q96P56 530 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 GCNAQ96QF7 691 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 APBA2Q99767 749 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TBC1D13Q9NVG8 400 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CLIC5Q9NZA1 410 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 RIMS3Q9UJD0 308 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 DMTF1Q9Y222 760 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TRIP11Q15643 1979 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 PRSS51A0A1B0GVH4 220 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 ARHGEF37A1IGU5 675 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
NKRF-204ENST00000542113 CFLARO15519 480 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 GRID2O43424 1007 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 VAPBO95292 243 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 CHRNGP07510 517 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 NMBRP28336 390 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 CLCN5P51795 746 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 CRYBB1P53674 252 aaPredicted RBP6.87□□□□□ -1.31
NKRF-204ENST00000542113 PITX1P78337 314 aaPredicted RBP6.87□□□□□ -1.31
NKRF-204ENST00000542113 NSUN2Q08J23 767 aaKnown RBP eCLIP6.87□□□□□ -1.31
NKRF-204ENST00000542113 ZBTB17Q13105 803 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 BRMS1LQ5PSV4 323 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 PM20D1Q6GTS8 502 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 BORAQ6PGQ7 559 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 B3GNT6Q6ZMB0 384 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 BHLHE22Q8NFJ8 381 aaPredicted RBP6.87□□□□□ -1.31
NKRF-204ENST00000542113 AGR3Q8TD06 166 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 KCTD4Q8WVF5 259 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 CDCA5Q96FF9 252 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
NKRF-204ENST00000542113 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
NKRF-204ENST00000542113 UPF3AQ9H1J1 476 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms