RNA–Protein interactions for RNA: ENST00000542016.6

RBM23-205, Transcript of RNA binding motif protein 23, human

TSL 2 BASIC

Gene RBM23, Length 1,743 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-205	ENST00000542016	CASQ1	P31415	396 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	PTPN5	P54829	565 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	SRSF5	Q13243	272 aa	Known RBP	11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	RPS6KA1	Q15418	735 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	CARD16	Q5EG05	197 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	WDR5B	Q86VZ2	330 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	SLC35F6	Q8N357	371 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	FRMD1	Q8N878	549 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	TSEN2	Q8NCE0	465 aa	Known RBP	11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	OR2AP1	Q8NGE2	309 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	OR6K2	Q8NGY2	324 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	UBE2Q2	Q8WVN8	375 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	PRCC	Q92733	491 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	HAUS1	Q96CS2	278 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	HDAC11	Q96DB2	347 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	SIPA1	Q96FS4	1042 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	EXOC2	Q96KP1	924 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	TSGA13	Q96PP4	275 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	WDR24	Q96S15	920 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	LGMN	Q99538	433 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	LHX3	Q9UBR4	397 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	SARDH	Q9UL12	918 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	PPM1H	Q9ULR3	514 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	PCDHGA2	Q9Y5H1	932 aa		11.15	□□□□□ -0.62
RBM23-205	ENST00000542016	SHROOM3	Q8TF72	1996 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	MUSK	O15146	869 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	ALOX15B	O15296	676 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	LILRB5	O75023	590 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	IL1B	P01584	269 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	RGR	P47804	291 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	NR2C2	P49116	596 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	CCNH	P51946	323 aa	Predicted RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	METAP1	P53582	386 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	RHOA	P61586	193 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	PPID	Q08752	370 aa	Known RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	RFTN1	Q14699	578 aa	Predicted RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	LBR	Q14739	615 aa	Known RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	CST6	Q15828	149 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	MAP7D1	Q3KQU3	841 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	TMCO4	Q5TGY1	634 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	ZNF776	Q68DI1	518 aa	Predicted RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	PLPP6	Q8IY26	295 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	FAM160A2	Q8N612	972 aa	Predicted RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	KIF18A	Q8NI77	898 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	RLN3	Q8WXF3	142 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	OR8D1	Q8WZ84	308 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	CCDC114	Q96M63	670 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	ZNF599	Q96NL3	588 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	PSKH2	Q96QS6	385 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	USP36	Q9P275	1121 aa	Known RBP	11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	WASF2	Q9Y6W5	498 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016		R4GN57	208 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	FANCM	Q8IYD8	2048 aa		11.15	□□□□□ -0.63
RBM23-205	ENST00000542016	SDK1	Q7Z5N4	2213 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	APOC4-APOC2	K7ER74	178 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	KCNK3	O14649	394 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	ENC1	O14682	589 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	MATN3	O15232	486 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	MID1	O15344	667 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	HR	O43593	1189 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	RNASEH1	O60930	286 aa	Known RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	GJB3	O75712	270 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	TJP3	O95049	919 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	GSR	P00390	522 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	APOC2	P02655	101 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	CCNC	P24863	283 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	GK	P32189	559 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	CHRNA3	P32297	505 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	P2RY2	P41231	377 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	RECQL	P46063	649 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	PSMD8	P48556	350 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	TPMT	P51580	245 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	SNRPD1	P62314	119 aa	Known RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	ZBTB16	Q05516	673 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	KLF1	Q13351	362 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	HNRNPD	Q14103	355 aa	Known RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	PDK1	Q15118	436 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	TIGD7	Q6NT04	549 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	B4GALNT4	Q76KP1	1039 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	PGBD5	Q8N414	524 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	CCNY	Q8ND76	341 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	GRIN3A	Q8TCU5	1115 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	MAML1	Q92585	1016 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	P3H4	Q92791	437 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	FATE1	Q969F0	183 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	GDAP1L1	Q96MZ0	367 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	CINP	Q9BW66	212 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	CARD9	Q9H257	536 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	ITM2C	Q9NQX7	267 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	SERGEF	Q9UGK8	458 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	IL36A	Q9UHA7	158 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	INVS	Q9Y283	1065 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	JRKL	Q9Y4A0	524 aa		11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-205	ENST00000542016	ZNF292	O60281	2723 aa		11.13	□□□□□ -0.63
RBM23-205	ENST00000542016	TCRBV7S2A1N4T	A0A589	114 aa		11.13	□□□□□ -0.63
RBM23-205	ENST00000542016	KCNK1	O00180	336 aa		11.13	□□□□□ -0.63
RBM23-205	ENST00000542016	PPP1R12A	O14974	1030 aa	Predicted RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms