RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TM4SF5O14894 197 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 MUSKO15146 869 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 ALOX15BO15296 676 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 PRAMEF11O60813 436 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 GJB3O75712 270 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 TMCC1O94876 653 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 FSBPO95073 299 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 PEX11BO96011 259 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 ETFBP38117 255 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 RGRP47804 291 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 CCNHP51946 323 aaPredicted RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 CDH6P55285 790 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 LMNB2Q03252 620 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 MYLK3Q32MK0 819 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 TTC31Q49AM3 519 aaPredicted RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 INO80DQ53TQ3 878 aaPredicted RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 KIAA0895LQ68EN5 471 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 ZNF354CQ86Y25 554 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 CCDC170Q8IYT3 715 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 RGL4Q8IZJ4 473 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 PCDH20Q8N6Y1 951 aaKnown RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 SPC24Q8NBT2 197 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 OR2I1PQ8NGU4 316 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 OR14C36Q8NHC7 312 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 PCDH19Q8TAB3 1148 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 LRRN4Q8WUT4 740 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 HEPHQ9BQS7 1158 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 MIR1-1HGQ9H1L0 117 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 GOLPH3Q9H4A6 298 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 LHX3Q9UBR4 397 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 IL36AQ9UHA7 158 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
YBX3-212ENST00000542002 INTUQ9ULD6 942 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 FZD4Q9ULV1 537 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 HPCAL4Q9UM19 191 aa9.9□□□□□ -0.82
YBX3-212ENST00000542002 TBC1D3DA0A087WVF3 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3IA0A087WXS9 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3EA0A087X179 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3KA0A087X1G2 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TTC24A2A3L6 582 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 DCDC2BA2VCK2 349 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3FA6NER0 549 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 MEI4A8MW99 385 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 PRR5-ARHGAP8B1AHC4 643 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3LB9A6J9 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 H3BRJ5 948 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 DFFAO00273 331 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 PLRG1O43660 514 aaKnown RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 BUB1BO60566 1050 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 MAFKO60675 156 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 NDUFA10O95299 355 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 CFIP05156 583 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 SERPINF2P08697 491 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3HP0C7X1 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 ENGP17813 658 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 ITIH2P19823 946 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 CDC25BP30305 580 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 MAN1A1P33908 653 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 GJC1P36383 396 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 ARHGAP25P42331 645 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 ID4P47928 161 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 CSNK1EP49674 416 aaKnown RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 PPP2CBP62714 309 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 PPP2CAP67775 309 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 ARHGAP8P85298 464 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 SLC10A2Q12908 348 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 DUOXA1Q1HG43 343 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 AASDHQ4L235 1098 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 ANKRD20A8PQ5CZ79 823 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 WDR45BQ5MNZ6 344 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 FAM182AQ5T1J6 154 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 SYCP2LQ5T4T6 812 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 STPG1Q5TH74 334 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 FAM46CQ5VWP2 391 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3GQ6DHY5 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3CQ6IPX1 549 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 LAYNQ6UX15 382 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 DSG4Q86SJ6 1040 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TMTC1Q8IUR5 882 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 RHOT2Q8IXI1 618 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TBC1D3Q8IZP1 549 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 ZCCHC9Q8N567 271 aaKnown RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 PQLC3Q8N755 202 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 KCTD6Q8NC69 237 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 TSEN2Q8NCE0 465 aaKnown RBP9.89□□□□□ -0.83
YBX3-212ENST00000542002 OR2AP1Q8NGE2 309 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 OR2T34Q8NGX1 318 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 RFFLQ8WZ73 363 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 HDAC8Q9BY41 377 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 LACRTQ9GZZ8 138 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 PCED1AQ9H1Q7 454 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 SLC6A14Q9UN76 642 aa9.89□□□□□ -0.83
YBX3-212ENST00000542002 THADAQ6YHU6 1953 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 PLXND1Q9Y4D7 1925 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms