RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ART4Q93070 314 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF707Q96C28 371 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 TIFAQ96CG3 184 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 C9orf72Q96LT7 481 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 APOL2Q9BQE5 337 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 OSBPL2Q9H1P3 480 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SEMA4AQ9H3S1 761 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SUV39H2Q9H5I1 410 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 MSRAQ9UJ68 235 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CLEC4EQ9ULY5 219 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HPCAL4Q9UM19 191 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SSX2IPQ9Y2D8 614 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CHD5Q8TDI0 1954 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ATG2BQ96BY7 2078 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CCDC78A2IDD5 438 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 GOLGA8KD6RF30 607 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 DNALI1O14645 258 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 GREM1O60565 184 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 FSBPO95073 299 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SYF2O95926 243 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 JCHAINP01591 159 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 APRTP07741 180 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 F7P08709 466 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 OR1E1P30953 314 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HNRNPH1P31943 449 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HSD17B3P37058 310 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 MNAT1P51948 309 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 AIF1P55008 147 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CREMQ03060 361 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CUL1Q13616 776 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PRKD1Q15139 912 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PABPC1LQ4VXU2 614 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ANKRD20A2Q5SQ80 823 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 RNASEH2BQ5TBB1 312 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ANKRD20A1Q5TYW2 823 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ANKRD20A3Q5VUR7 823 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SNX30Q5VWJ9 437 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HIBCHQ6NVY1 386 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 DRICH1Q6PGQ1 229 aaPredicted RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 LINGO4Q6UY18 593 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 OTOP3Q7RTS5 596 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PSTKQ8IV42 348 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CCDC13Q8IYE1 715 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 AGGF1Q8N302 714 aaeCLIP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SPATA22Q8NHS9 363 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 SMG7Q92540 1137 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 MRPS31Q92665 395 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PABPC5Q96DU9 382 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ERLEC1Q96DZ1 483 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 MRRFQ96E11 262 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ZFYVE19Q96K21 471 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 CABS1Q96KC9 395 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 GORASP1Q9BQQ3 440 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 WDR83Q9BRX9 315 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 ZYG11BQ9C0D3 744 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 PCDH9Q9HC56 1237 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 FAM114A2Q9NRY5 505 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 HSFX1Q9UBD0 423 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 DRG1Q9Y295 367 aaKnown RBP7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 RWDD3Q9Y3V2 267 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 FAM169AQ9Y6X4 670 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 DOCK8Q8NF50 2099 aa7.89□□□□□ -1.15
AC005840.3-201ENST00000541888 BCLAF3A2AJT9 711 aaKnown RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 SRRM3A6NNA2 597 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 F5H5T6 163 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 LEFTY2O00292 366 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 GNB5O14775 395 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 TRIM24O15164 1050 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 EIF3HO15372 352 aaKnown RBP eCLIP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 MAFKO60675 156 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 TBL1XO60907 577 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 MT-CYBP00156 380 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 ITGB2P05107 769 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 RB1P06400 928 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 PTPN3P26045 913 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 TNFRSF8P28908 595 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 CD68P34810 354 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 VIPR2P41587 438 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 GALNT2Q10471 571 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 KYNUQ16719 465 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 TCEAL5Q5H9L2 206 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 NUGGCQ68CJ6 796 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 TRIM68Q6AZZ1 485 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 RHBDF2Q6PJF5 856 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 GET4Q7L5D6 327 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 PID1Q7Z2X4 250 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 IGDCC3Q8IVU1 814 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 CDKL3Q8IVW4 592 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 MPP5Q8N3R9 675 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 CARNMT1Q8N4J0 409 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 ATPAF2Q8N5M1 289 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 RTL3Q8N8U3 475 aaKnown RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 SH3RF2Q8TEC5 729 aa7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 PRCCQ92733 491 aaPredicted RBP7.88□□□□□ -1.15
AC005840.3-201ENST00000541888 USP13Q92995 863 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms