RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RSPH14Q9UHP6 348 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 A0A1B0GVM2 712 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 TCAF2A6NFQ2 919 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 H0Y626 953 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 J3KR12 359 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 EIF3HO15372 352 aaKnown RBP eCLIP28.26■■■□□ 2.12
CCM2-218ENST00000541586 HOXC11O43248 304 aaPredicted RBP28.26■■■□□ 2.12
CCM2-218ENST00000541586 SYF2O95926 243 aaKnown RBP28.26■■■□□ 2.12
CCM2-218ENST00000541586 PENKP01210 267 aaPredicted RBP28.26■■■□□ 2.12
CCM2-218ENST00000541586 ACVRL1P37023 503 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 SERINC3Q13530 473 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 TTC39BQ5VTQ0 682 aaPredicted RBP28.26■■■□□ 2.12
CCM2-218ENST00000541586 MAML1Q92585 1016 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 GORASP1Q9BQQ3 440 aa28.26■■■□□ 2.12
CCM2-218ENST00000541586 EIF2B3Q9NR50 452 aaKnown RBP28.26■■■□□ 2.12
CCM2-218ENST00000541586 KIF26AQ9ULI4 1882 aaPredicted RBP28.26■■■□□ 2.11
CCM2-218ENST00000541586 TRIM24O15164 1050 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 PEX11BO96011 259 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 SHBGP04278 402 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 NFKB1P19838 968 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 LMAN1P49257 510 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 CAND1Q86VP6 1230 aaKnown RBP28.26■■■□□ 2.11
CCM2-218ENST00000541586 ZNF354CQ86Y25 554 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 MFN1Q8IWA4 741 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 CCDC117Q8IWD4 279 aaPredicted RBP28.26■■■□□ 2.11
CCM2-218ENST00000541586 UBALD2Q8IYN6 164 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 PDCD7Q8N8D1 485 aaKnown RBP28.26■■■□□ 2.11
CCM2-218ENST00000541586 OR52K2Q8NGK3 314 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 UHMK1Q8TAS1 419 aaKnown RBP28.26■■■□□ 2.11
CCM2-218ENST00000541586 FATE1Q969F0 183 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 SH3GL2Q99962 352 aa28.26■■■□□ 2.11
CCM2-218ENST00000541586 SPECC1L-ADORA2AF8WAN1 911 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 AVILO75366 819 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 CDK16Q00536 496 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 ZNF844Q08AG5 666 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 CDH18Q13634 790 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 GAB4Q2WGN9 574 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 BBS9Q3SYG4 887 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 HSP90B2PQ58FF3 399 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 MPP7Q5T2T1 576 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 ZNF534Q76KX8 674 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 KRT222Q8N1A0 295 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 SP110Q9HB58 689 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 MED4Q9NPJ6 270 aa28.25■■■□□ 2.11
CCM2-218ENST00000541586 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.24■■■□□ 2.11
CCM2-218ENST00000541586 CD72P21854 359 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 NUMBP49757 651 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 GNA12Q03113 381 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 ZNF177Q13360 481 aaPredicted RBP28.24■■■□□ 2.11
CCM2-218ENST00000541586 CEP85LQ5SZL2 805 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 C6orf118Q5T5N4 469 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 ANKMY2Q8IV38 441 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 WFDC5Q8TCV5 224 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 ARHGEF2Q92974 986 aaKnown RBP28.24■■■□□ 2.11
CCM2-218ENST00000541586 CHFRQ96EP1 664 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 WDR83Q9BRX9 315 aaKnown RBP28.24■■■□□ 2.11
CCM2-218ENST00000541586 MAGEH1Q9H213 219 aa28.24■■■□□ 2.11
CCM2-218ENST00000541586 C8orf33Q9H7E9 229 aaPredicted RBP28.24■■■□□ 2.11
CCM2-218ENST00000541586 A0A0D9SEW6 157 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 TULP3O75386 442 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 CTHP32929 405 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 EIF3BP55884 814 aaKnown RBP28.23■■■□□ 2.11
CCM2-218ENST00000541586 CBLBQ13191 982 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 TPRG1Q6ZUI0 275 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 TTC25Q96NG3 672 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 RBM22Q9NW64 420 aaKnown RBP eCLIP28.23■■■□□ 2.11
CCM2-218ENST00000541586 TBC1D30Q9Y2I9 924 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 OPA1O60313 960 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 CACNG3O60359 315 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 LUC7L3O95232 432 aaKnown RBP28.23■■■□□ 2.11
CCM2-218ENST00000541586 GRIA1P42261 906 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 IL10RBQ08334 325 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 IFFO1Q0D2I5 559 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 HNRNPDQ14103 355 aaKnown RBP28.23■■■□□ 2.11
CCM2-218ENST00000541586 FSCBQ5H9T9 825 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 TXNDC11Q6PKC3 985 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 SETD3Q86TU7 594 aaPredicted RBP28.23■■■□□ 2.11
CCM2-218ENST00000541586 DEC1Q9P2X7 70 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 WNT16Q9UBV4 365 aa28.23■■■□□ 2.11
CCM2-218ENST00000541586 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.23■■■□□ 2.11
CCM2-218ENST00000541586 ILVBLA1L0T0 632 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 RHOCP08134 193 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 OPRD1P41143 372 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 MAGEA3P43357 314 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 DGKGP49619 791 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 GALK1P51570 392 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 RENBPP51606 427 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 SARNPP82979 210 aaKnown RBP28.22■■■□□ 2.11
CCM2-218ENST00000541586 ZXDAP98168 799 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 MLF2Q15773 248 aaPredicted RBP28.22■■■□□ 2.11
CCM2-218ENST00000541586 RALGPS2Q86X27 583 aaPredicted RBP28.22■■■□□ 2.11
CCM2-218ENST00000541586 ETFBKMTQ8IXQ9 262 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 OR7D4Q8NG98 312 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 PYROXD1Q8WU10 500 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 LRRC4CQ9HCJ2 640 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 CHD5Q8TDI0 1954 aa28.22■■■□□ 2.11
CCM2-218ENST00000541586 HLA-DQB2P05538 268 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 KDSRQ06136 332 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 PON2Q15165 354 aa28.21■■■□□ 2.11
CCM2-218ENST00000541586 CXorf57Q6NSI4 855 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms