RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CBLBQ13191 982 aa8.83□□□□□ -1
THBS3-210ENST00000541576 MARC1Q5VT66 337 aa8.83□□□□□ -1
THBS3-210ENST00000541576 IL31Q6EBC2 164 aa8.83□□□□□ -1
THBS3-210ENST00000541576 TMC5Q6UXY8 1006 aa8.83□□□□□ -1
THBS3-210ENST00000541576 OTOP3Q7RTS5 596 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PALM2Q8IXS6 379 aa8.83□□□□□ -1
THBS3-210ENST00000541576 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.83□□□□□ -1
THBS3-210ENST00000541576 TDRD5Q8NAT2 981 aaKnown RBP8.83□□□□□ -1
THBS3-210ENST00000541576 ATP11CQ8NB49 1132 aa8.83□□□□□ -1
THBS3-210ENST00000541576 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
THBS3-210ENST00000541576 OR7D4Q8NG98 312 aa8.83□□□□□ -1
THBS3-210ENST00000541576 CDCA3Q99618 268 aaPredicted RBP8.83□□□□□ -1
THBS3-210ENST00000541576 SPON2Q9BUD6 331 aa8.83□□□□□ -1
THBS3-210ENST00000541576 GLOD4Q9HC38 313 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
THBS3-210ENST00000541576 CPSF2Q9P2I0 782 aaKnown RBP8.83□□□□□ -1
THBS3-210ENST00000541576 CHMP2BQ9UQN3 213 aa8.83□□□□□ -1
THBS3-210ENST00000541576 TBC1D30Q9Y2I9 924 aa8.83□□□□□ -1
THBS3-210ENST00000541576 RFXAPO00287 272 aa8.83□□□□□ -1
THBS3-210ENST00000541576 CACNG3O60359 315 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PRAMEF11O60813 436 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PIAS1O75925 651 aa8.83□□□□□ -1
THBS3-210ENST00000541576 ANP32DO95626 131 aa8.83□□□□□ -1
THBS3-210ENST00000541576 BMP8BP34820 402 aa8.83□□□□□ -1
THBS3-210ENST00000541576 SLC10A7Q0GE19 358 aa8.83□□□□□ -1
THBS3-210ENST00000541576 ZKSCAN8Q15776 578 aaPredicted RBP8.83□□□□□ -1
THBS3-210ENST00000541576 AP1ARQ63HQ0 302 aa8.83□□□□□ -1
THBS3-210ENST00000541576 LRRC8BQ6P9F7 803 aa8.83□□□□□ -1
THBS3-210ENST00000541576 C3orf62Q6ZUJ4 267 aa8.83□□□□□ -1
THBS3-210ENST00000541576 MPP5Q8N3R9 675 aa8.83□□□□□ -1
THBS3-210ENST00000541576 CPXM2Q8N436 756 aa8.83□□□□□ -1
THBS3-210ENST00000541576 CARNMT1Q8N4J0 409 aa8.83□□□□□ -1
THBS3-210ENST00000541576 OR52K2Q8NGK3 314 aa8.83□□□□□ -1
THBS3-210ENST00000541576 DYDC1Q8WWB3 177 aa8.83□□□□□ -1
THBS3-210ENST00000541576 USP13Q92995 863 aaPredicted RBP8.83□□□□□ -1
THBS3-210ENST00000541576 TIFAQ96CG3 184 aa8.83□□□□□ -1
THBS3-210ENST00000541576 LRRC39Q96DD0 335 aa8.83□□□□□ -1
THBS3-210ENST00000541576 MRPL38Q96DV4 380 aaKnown RBP8.83□□□□□ -1
THBS3-210ENST00000541576 FCRL5Q96RD9 977 aa8.83□□□□□ -1
THBS3-210ENST00000541576 TRIM56Q9BRZ2 755 aaKnown RBP8.83□□□□□ -1
THBS3-210ENST00000541576 MLPHQ9BV36 600 aaPredicted RBP8.83□□□□□ -1
THBS3-210ENST00000541576 SFXN1Q9H9B4 322 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PLAC1Q9HBJ0 212 aa8.83□□□□□ -1
THBS3-210ENST00000541576 TDP1Q9NUW8 608 aa8.83□□□□□ -1
THBS3-210ENST00000541576 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
THBS3-210ENST00000541576 E2F8A0AVK6 867 aa8.82□□□□□ -1
THBS3-210ENST00000541576 H0Y626 953 aa8.82□□□□□ -1
THBS3-210ENST00000541576 SUN1O94901 812 aa8.82□□□□□ -1
THBS3-210ENST00000541576 LUC7L3O95232 432 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 CEBPBP17676 345 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CXorf57Q6NSI4 855 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CROCCP2Q86T23 111 aa8.82□□□□□ -1
THBS3-210ENST00000541576 VN1R2Q8NFZ6 395 aa8.82□□□□□ -1
THBS3-210ENST00000541576 DDI1Q8WTU0 396 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ING5Q8WYH8 240 aa8.82□□□□□ -1
THBS3-210ENST00000541576 BHMTQ93088 406 aa8.82□□□□□ -1
THBS3-210ENST00000541576 OXNAD1Q96HP4 312 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 SIGLEC10Q96LC7 697 aa8.82□□□□□ -1
THBS3-210ENST00000541576 PPP1R2P1Q96PQ5 205 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CCDC77Q9BR77 488 aa8.82□□□□□ -1
THBS3-210ENST00000541576 IGFLR1Q9H665 355 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ATP13A1Q9HD20 1204 aa8.82□□□□□ -1
THBS3-210ENST00000541576 NT5MQ9NPB1 228 aa8.82□□□□□ -1
THBS3-210ENST00000541576 SPATS2LQ9NUQ6 558 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 UBP1Q9NZI7 540 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CTNNAL1Q9UBT7 734 aa8.82□□□□□ -1
THBS3-210ENST00000541576 AAR2Q9Y312 384 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 HELZP42694 1942 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 FOXO6A8MYZ6 492 aa8.82□□□□□ -1
THBS3-210ENST00000541576 USP12O75317 370 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TCEA3O75764 348 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ANXA9O76027 345 aa8.82□□□□□ -1
THBS3-210ENST00000541576 HOXD9P28356 352 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 PHBP35232 272 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ETFBP38117 255 aa8.82□□□□□ -1
THBS3-210ENST00000541576 MMP13P45452 471 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ERFP50548 548 aa8.82□□□□□ -1
THBS3-210ENST00000541576 OXCT1P55809 520 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CDH18Q13634 790 aa8.82□□□□□ -1
THBS3-210ENST00000541576 KCNC3Q14003 757 aa8.82□□□□□ -1
THBS3-210ENST00000541576 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 STAT4Q14765 748 aa8.82□□□□□ -1
THBS3-210ENST00000541576 MPPE1Q53F39 396 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TMCO4Q5TGY1 634 aa8.82□□□□□ -1
THBS3-210ENST00000541576 AGBL2Q5U5Z8 902 aa8.82□□□□□ -1
THBS3-210ENST00000541576 KCTD11Q693B1 232 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TEX26Q8N6G2 289 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ROPN1BQ9BZX4 212 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 MUC3BQ9H195 1237 aa8.82□□□□□ -1
THBS3-210ENST00000541576 LRRC40Q9H9A6 602 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ROPN1Q9HAT0 212 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 DZANK1Q9NVP4 752 aa8.82□□□□□ -1
THBS3-210ENST00000541576 MAD1L1Q9Y6D9 718 aa8.82□□□□□ -1
THBS3-210ENST00000541576 HMGB1P1B2RPK0 211 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 PSMD3O43242 534 aa8.82□□□□□ -1
THBS3-210ENST00000541576 PRAMEF12O95522 483 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ATP6V1G2O95670 118 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TSHRP16473 764 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms