RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RUNX1T1Q06455 604 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 BMPR2Q13873 1038 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GCKRQ14397 625 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GAB4Q2WGN9 574 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PABPC1LQ4VXU2 614 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 RNFT1Q5M7Z0 435 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SUSD4Q5VX71 490 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PRR5LQ6MZQ0 368 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SLC25A24Q6NUK1 477 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CRELD2Q6UXH1 353 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 PDSS2Q86YH6 399 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PLXDC1Q8IUK5 500 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ARHGAP12Q8IWW6 846 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 FBXW8Q8N3Y1 598 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 MINDY1Q8N5J2 469 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GPR161Q8N6U8 529 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 PTGR2Q8N8N7 351 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 TMEM116Q8NCL8 245 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CCDC110Q8TBZ0 833 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 C17orf50Q8WW18 174 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SLC13A3Q8WWT9 602 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 MRPS27Q92552 414 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 FAM149B1Q96BN6 582 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 INTS12Q96CB8 462 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 TMCO6Q96DC7 493 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ZDHHC12Q96GR4 267 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 NLRP4Q96MN2 994 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SLC5A7Q9GZV3 580 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SLC25A32Q9H2D1 315 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GPR35Q9HC97 309 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 TCF7L2Q9NQB0 619 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 TMEM140Q9NV12 185 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 NMRK1Q9NWW6 199 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ZSCAN32Q9NX65 697 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PIM2Q9P1W9 311 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CLIP2Q9UDT6 1046 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 FETUBQ9UGM5 382 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PTBP2Q9UKA9 531 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 SUFUQ9UMX1 484 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PPIEQ9UNP9 301 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 ITM2BQ9Y287 266 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 RPH3AQ9Y2J0 694 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 RWDD3Q9Y3V2 267 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 UTYO14607 1347 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SH3TC1Q8TE82 1336 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CDHR2Q9BYE9 1310 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ABCC12Q96J65 1359 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SLX4Q8IY92 1834 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SPEF2Q9C093 1822 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CYP2D7A0A087X1C5 515 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TCRBV5S2A0A599 114 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ARHGEF37A1IGU5 675 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SLC38A8A6NNN8 435 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ENO4A6NNW6 628 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 PRR33A8MZF0 331 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TEX22C9J3V5 150 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 H7C4K7 107 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 VEGFDO43915 354 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 INHBAP08476 426 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 WEE2P0C1S8 567 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CYP2C9P11712 490 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 COX7A2P14406 83 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 GABRB1P18505 474 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 RAB6AP20340 208 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 AVPR2P30518 371 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CRHR1P34998 444 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ARCN1P48444 511 aaKnown RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 BMXP51813 675 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CETN1Q12798 172 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 GPS1Q13098 491 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TDGQ13569 410 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TRA2AQ13595 282 aaKnown RBP eCLIP5.7□□□□□ -1.5
DDB1-219ENST00000541513 BOP1Q14137 746 aaKnown RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 RPS6KA1Q15418 735 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 PPP1R7Q15435 360 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ZNF750Q32MQ0 723 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 FILIP1LQ4L180 1135 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 MANEALQ5VSG8 457 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ETFRF1Q6IPR1 90 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 HEPHL1Q6MZM0 1159 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CDC73Q6P1J9 531 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 MAMDC4Q6UXC1 1216 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SEM1Q6ZVN7 128 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 ACAD11Q709F0 780 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 UNC5BQ8IZJ1 945 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TNIP2Q8NFZ5 429 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 OR56B2PQ8NGI1 322 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 PSMA8Q8TAA3 256 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 FRAT1Q92837 279 aaPredicted RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 RMDN2Q96LZ7 410 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 C5orf34Q96MH7 638 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 RUFY1Q96T51 708 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 KCNK16Q96T55 309 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 UHRF1Q96T88 793 aaPredicted RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 SPATA5L1Q9BVQ7 753 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms