RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 EFCAB3Q8N7B9 438 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ACTRT2Q8TDY3 377 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 P2RY11Q96G91 374 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ABCC13Q9NSE7 274 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 TMEM216Q9P0N5 145 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 SFMBT1Q9UHJ3 866 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 NUDT5Q9UKK9 219 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 APOBEC2Q9Y235 224 aaKnown RBP17.45■□□□□ 0.38
SPIDR-227ENST00000541342 NUP205Q92621 2012 aa17.45■□□□□ 0.38
SPIDR-227ENST00000541342 ANKRD33BA6NCL7 494 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 GLRA3O75311 464 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ALDH2P05091 517 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 SERPINE1P05121 402 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 FGFR3P22607 806 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 PEX2P28328 305 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 HCAR3P49019 387 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ANKRD33Q7Z3H0 272 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ATAD1Q8NBU5 361 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CASP10Q92851 521 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 FUBP3Q96I24 572 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CEP41Q9BYV8 373 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 A0A1W2PQH9 124 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CXCL10P02778 98 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ITGA2BP08514 1039 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ITGAXP20702 1163 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 GLUD2P49448 558 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 AQP4P55087 323 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 USP46P62068 366 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 SLC39A5Q6ZMH5 540 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 FRMD7Q6ZUT3 714 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 ACAD11Q709F0 780 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 BCL7CQ8WUZ0 217 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CCDC124Q96CT7 223 aaKnown RBP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 GBP5Q96PP8 586 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 DNAJC28Q9NX36 388 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 A0A0A0MRY4 1105 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 E2F8A0AVK6 867 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 TBKBP1A7MCY6 615 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 IRAK2O43187 625 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 LRIG2O94898 1065 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 KLHL2O95198 593 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 MGAT1P26572 445 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CYP2C18P33260 490 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 GRIA2P42262 883 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 RBBP5Q15291 538 aaKnown RBP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 NFE2Q16621 373 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CNPY1Q3B7I2 92 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 BTBD8Q5XKL5 378 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 SPATA13Q96N96 652 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 COPG2Q9UBF2 871 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 NEU3Q9UQ49 428 aa17.44■□□□□ 0.38
SPIDR-227ENST00000541342 SOAT2O75908 522 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 F7P08709 466 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-227ENST00000541342 ASPHQ12797 758 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 RTP2Q5QGT7 225 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 TAS1R1Q7RTX1 841 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 HPS6Q86YV9 775 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 GPR152Q8TDT2 470 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 SLC26A7Q8TE54 656 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 RNF34Q969K3 372 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 SPATA16Q9BXB7 569 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 TRIM4Q9C037 500 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 SMOC2Q9H3U7 446 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 ARHGEF38Q9NXL2 777 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 POMPQ9Y244 141 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 GREB1Q4ZG55 1949 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 H3BNX3 289 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 RNF103O00237 685 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 ZMPSTE24O75844 475 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 VNN2O95498 520 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 GALTP07902 379 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 PIM1P11309 404 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-227ENST00000541342 GSTT1P30711 240 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 SESN2P58004 480 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-227ENST00000541342 PDK1Q15118 436 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 ARTNQ5T4W7 220 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 FUT10Q6P4F1 479 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 CCNYQ8ND76 341 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 C8orf48Q96LL4 319 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 TRIM62Q9BVG3 475 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 CRISPLD1Q9H336 500 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 SHROOM3Q8TF72 1996 aa17.43■□□□□ 0.38
SPIDR-227ENST00000541342 A0A1B0GVG6 124 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 ZBTB14O43829 449 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 HARS2P49590 506 aaKnown RBP17.42■□□□□ 0.38
SPIDR-227ENST00000541342 DLG1Q12959 904 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 TRIM60Q495X7 471 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 PDPK2PQ6A1A2 396 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 LRRC8BQ6P9F7 803 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 RASSF3Q86WH2 238 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 NUP93Q8N1F7 819 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 NCSTNQ92542 709 aa17.42■□□□□ 0.38
SPIDR-227ENST00000541342 ARPP19P56211 112 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms