RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 GOLGA8SH3BPF8 625 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 TXNDC9O14530 226 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 SIN3BO75182 1162 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 RFPL1O75677 317 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ALDH1A2O94788 518 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 DDHD2O94830 711 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 EOMESO95936 686 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 POMCP01189 267 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 EIF2S1P05198 315 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 GALTP07902 379 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 C7P10643 843 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 MCF2P10911 925 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 L1CAMP32004 1257 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 SERPINB5P36952 375 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 MTHFRP42898 656 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 KPNA2P52292 529 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 ADARP55265 1226 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 PSMC1P62191 440 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 RPL7AP62424 266 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 ARHGAP8P85298 464 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 TBL3Q12788 808 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 DCAF4L1Q3SXM0 396 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 FASTKD1Q53R41 847 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 NOMO2Q5JPE7 1267 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 UBXN11Q5T124 520 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 STEAP4Q687X5 459 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 PDPK2PQ6A1A2 396 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ARPINQ7Z6K5 226 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ZNF554Q86TJ5 538 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 CPNE8Q86YQ8 564 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 COLGALT2Q8IYK4 626 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 FAM71DQ8N9W8 422 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 KYQ8NBH2 561 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 GOLM1Q8NBJ4 401 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 GABPB2Q8TAK5 448 aaPredicted RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 IGSF21Q96ID5 467 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 FAR2Q96K12 515 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 SNX27Q96L92 541 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 PRRX2Q99811 253 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 TARS2Q9BW92 718 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 OSBPL11Q9BXB4 747 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 MRPL9Q9BYD2 267 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 HAPLN2Q9GZV7 340 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 SDCBP2Q9H190 292 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 EFCAB1Q9HAE3 211 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 PALMDQ9NP74 551 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ACP6Q9NPH0 428 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 UTP6Q9NYH9 597 aaKnown RBP10.57□□□□□ -0.72
CHFR-219ENST00000541341 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 ANKRD6Q9Y2G4 727 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 WDR37Q9Y2I8 494 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 TTLL3Q9Y4R7 772 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.724e-6■■■■■ 57
CHFR-219ENST00000541341 CCDC160A6NGH7 325 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TISP43B9A030 160 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 F8W810 466 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 STK25O00506 426 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 MDM4O15151 490 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 PI15O43692 258 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 NARSO43776 548 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 RNASEH1O60930 286 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 ZNF623O75123 536 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 LRCH4O75427 683 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TADA2AO75478 443 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 VNN1O95497 513 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CAPNS1P04632 268 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 SPATA31D3P0C874 917 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 CTSAP10619 480 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 VDRP11473 427 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 COX4I1P13073 169 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ETS1P14921 441 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 GPD1P21695 349 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 SCNN1AP37088 669 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ABCE1P61221 599 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 YWHAZP63104 245 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 HPCAP84074 193 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 PDE1BQ01064 536 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TRAP1Q12931 704 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 LLGL1Q15334 1064 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 ATAT1Q5SQI0 421 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 KIAA1841Q6NSI8 718 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 DHRS4L2Q6PKH6 230 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 GLB1LQ6UWU2 654 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 BNC2Q6ZN30 1099 aaPredicted RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 SPATA31D4Q6ZUB0 917 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TAS1R1Q7RTX1 841 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 DDX53Q86TM3 631 aaKnown RBP10.56□□□□□ -0.72
CHFR-219ENST00000541341 PRUNE1Q86TP1 453 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TTC30AQ86WT1 665 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 TREML1Q86YW5 311 aa10.56□□□□□ -0.72
CHFR-219ENST00000541341 PSTKQ8IV42 348 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms