RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MAGEA12P43365 314 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 SPANXN3Q5MJ09 141 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CLEC6AQ6EIG7 209 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ESRP1Q6NXG1 681 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ERLEC1Q96DZ1 483 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CCT7Q99832 543 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 SOX17Q9H6I2 414 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 DNAAF2Q9NVR5 837 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 TLK1Q9UKI8 766 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 RAP2CQ9Y3L5 183 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CEPT1Q9Y6K0 416 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 YJEFN3A6XGL0 299 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 KPNA7A9QM74 516 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 TGFB3P10600 412 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 MYL4P12829 197 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF26P17031 533 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADCYAP1R1P41586 468 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CTBSQ01459 385 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 INSCQ1MX18 579 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ANKDD1AQ495B1 522 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 RBM20Q5T481 1227 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 LIPMQ5VYY2 423 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARHGAP17Q68EM7 881 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 C16orf89Q6UX73 402 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF410Q86VK4 478 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZC3HC1Q86WB0 502 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PSTKQ8IV42 348 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ANKRD52Q8NB46 1076 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 IPMKQ8NFU5 416 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 EXT2Q93063 718 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLCO4A1Q96BD0 722 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 DRC3Q9H069 523 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 SETD4Q9NVD3 440 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ERAP1Q9NZ08 941 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADM5C9JUS6 153 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 TNFAIP8O95379 198 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 AP2A1O95782 977 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 FYNP06241 537 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 DESP17661 470 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 CDH2P19022 906 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHRM3P20309 590 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 AGKQ53H12 422 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 C9orf57Q5W0N0 161 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 HMBOX1Q6NT76 420 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHST15Q7LFX5 561 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 KDM1BQ8NB78 822 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 GAB3Q8WWW8 586 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 LPGAT1Q92604 370 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM79Q9BSE2 394 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 BRD8Q9H0E9 1235 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 VPS33BQ9H267 617 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 PCDHGA7Q9Y5G6 932 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 FBP2O00757 339 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 SDHDO14521 159 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 DCLK1O15075 740 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 ATP5BP06576 529 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 PSMC3P17980 439 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 BCAT1P54687 386 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 PSME3P61289 254 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 TNFAIP2Q03169 654 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 APOFQ13790 326 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 DPYSQ14117 519 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 CSHL1Q14406 222 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 KIAA0319Q5VV43 1072 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 LRRC8EQ6NSJ5 796 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZYG11AQ6WRX3 759 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 PGAM4Q8N0Y7 254 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 RP9Q8TA86 221 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 SERPINI1Q99574 410 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF385DQ9H6B1 395 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 EBF1Q9UH73 591 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 EGFL7Q9UHF1 273 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 V9GYQ6 96 aa10.5□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARHGEF37A1IGU5 675 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 MEIS3P2A8K0S8 358 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PPP6CO00743 305 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 AP1G1O43747 822 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 BCAS2O75934 225 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMCC1O94876 653 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 USP17L7P0C7H9 530 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 NCAM1P13591 858 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 GLUD2P49448 558 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 AFF1P51825 1210 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 EMP3P54852 163 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 XIAPP98170 497 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CBLBQ13191 982 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 ITPRIPL1Q6GPH6 555 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CYS1Q717R9 158 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRIML2Q8N7C3 387 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CNTD1Q8N815 330 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms