RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 PPM1LQ5SGD2 360 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RNF219Q5W0B1 726 aaPredicted RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RANBP10Q6VN20 620 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 ADGRD2Q7Z7M1 963 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 TMEM135Q86UB9 458 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RNF135Q8IUD6 432 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 SLC25A41Q8N5S1 370 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 MICAL1Q8TDZ2 1067 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 MRPS31Q92665 395 aaKnown RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 TADA1Q96BN2 335 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM107BQ9H098 131 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 ATP13A1Q9HD20 1204 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 BFARQ9NZS9 450 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 SLC2A6Q9UGQ3 507 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 AAR2Q9Y312 384 aaKnown RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 A0A1B0GVM2 712 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 TCAF2A6NFQ2 919 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 GOLGA8TH3BQL2 631 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CLDN11O75508 207 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 ANXA9O76027 345 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CD160O95971 181 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CKMP06732 381 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 FOXN2P32314 431 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 GMPRP36959 345 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 MAGEA10P43363 369 aaPredicted RBP12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 ABCG1P45844 678 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 NPY2RP49146 381 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 SLC7A9P82251 487 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 NR1H3Q13133 447 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 MTA1Q13330 715 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 TEAD2Q15562 447 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 IL31Q6EBC2 164 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM217AQ8IXS0 508 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 BANPQ8N9N5 519 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 BCAS4Q8TDM0 211 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 CERS2Q96G23 380 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF317Q96PQ6 595 aaPredicted RBP12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 ACE2Q9BYF1 805 aaPredicted RBP12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 MAGEH1Q9H213 219 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 SLC17A7Q9P2U7 560 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 SOX13Q9UN79 622 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 TBC1D30Q9Y2I9 924 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM237BA0A1B0GVD1 139 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ILVBLA1L0T0 632 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM47DPA6NHR8 397 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 LEFTY2O00292 366 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PRPF4O43172 522 aaKnown RBP eCLIP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 KDELR3O43731 214 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 RFPL1O75677 317 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 NEBLO76041 1014 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 TOP3BO95985 862 aaKnown RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 BMP1P13497 986 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 DRD4P21917 467 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 OXCT1P55809 520 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ARF5P84085 180 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SF3A3Q12874 501 aaKnown RBP eCLIP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF177Q13360 481 aaPredicted RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CYTH1Q15438 398 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SPANXN3Q5MJ09 141 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 LINGO4Q6UY18 593 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PACS1Q6VY07 963 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 RBM23Q86U06 439 aaKnown RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 RASSF3Q86WH2 238 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 EXOC2Q96KP1 924 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CCT8L2Q96SF2 557 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SEMA3CQ99985 751 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ASAH2Q9NR71 780 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PLK2Q9NYY3 685 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SAMD15Q9P1V8 674 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 OR51B4Q9Y5P0 310 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CEP290O15078 2479 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 MYOFQ9NZM1 2061 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PDE4DIPQ5VU43 2346 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 GMNCA6NCL1 334 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PSMD3O43242 534 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ZMPSTE24O75844 475 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 USP1O94782 785 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ASMTLO95671 621 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PRKCGP05129 697 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 POLBP06746 335 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ATXN1LP0C7T5 689 aaKnown RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 PYGBP11216 843 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ARNTP27540 789 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CSKP41240 450 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms