RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FECHP22830 423 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 GKP32189 559 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 HOXD12P35452 270 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ARHGAP25P42331 645 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 DPP6P42658 865 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ADPRHP54922 357 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 RHOAP61586 193 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 IRX4P78413 519 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 CNTN1Q12860 1018 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 DPYSL3Q14195 570 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ATXN7L2Q5T6C5 722 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ARHGAP12Q8IWW6 846 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 TP53INP2Q8IXH6 220 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ABCA7Q8IZY2 2146 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 LZTR1Q8N653 840 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 TMIEQ8NEW7 156 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 OR2AP1Q8NGE2 309 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 BIRC7Q96CA5 298 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 BAG1Q99933 345 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 HEPHQ9BQS7 1158 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 NUSAP1Q9BXS6 441 aaKnown RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 PCED1AQ9H1Q7 454 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ZDHHC6Q9H6R6 413 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 SP110Q9HB58 689 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 PDFQ9HBH1 243 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 FSCN3Q9NQT6 498 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 DYRK4Q9NR20 520 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ETNK2Q9NVF9 386 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 RCOR3Q9P2K3 495 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 UBA2Q9UBT2 640 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 EIF2B4Q9UI10 523 aaKnown RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 HYOU1Q9Y4L1 999 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 EPN1Q9Y6I3 576 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 RIF1Q5UIP0 2472 aaKnown RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3DA0A087WVF3 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3IA0A087WXS9 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3EA0A087X179 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3KA0A087X1G2 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 LNP1A1A4G5 178 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3FA6NER0 549 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PRR5-ARHGAP8B1AHC4 643 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3LB9A6J9 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 KRIT1O00522 736 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 SLC7A4O43246 635 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PRAMEF11O60813 436 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PALMO75781 387 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 IGSF6O95976 241 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3HP0C7X1 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 GNSP15586 552 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 IL4RP24394 825 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 ARSEP51690 589 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 SNRPD1P62314 119 aaKnown RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 ARHGAP8P85298 464 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PDK2Q15119 407 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TCEAL1Q15170 157 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 CYTH1Q15438 398 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 MYLK3Q32MK0 819 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 INO80DQ53TQ3 878 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 AGBL4Q5VU57 503 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PEAR1Q5VY43 1037 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 KIAA0895LQ68EN5 471 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3GQ6DHY5 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3CQ6IPX1 549 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 RAD9BQ6WBX8 426 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 RABEPKQ7Z6M1 372 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 MAP7D3Q8IWC1 876 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 TBC1D3Q8IZP1 549 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 ZCCHC9Q8N567 271 aaKnown RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 OR2T34Q8NGX1 318 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 CEP76Q8TAP6 659 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 FAM71BQ8TC56 605 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 PPP1R16AQ96I34 528 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 EXOC2Q96KP1 924 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 GDAP1L1Q96MZ0 367 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 SUSD2Q9UGT4 822 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 EVLQ9UI08 416 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
SNHG1-215ENST00000540904 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 FAM186AA6NE01 2351 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 FRYLO94915 3013 aa9.38□□□□□ -0.91
SNHG1-215ENST00000540904 DOCK4Q8N1I0 1966 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 LRRD1A4D1F6 860 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 RCCD1A6NED2 376 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 BCAT2O15382 392 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 PLRG1O43660 514 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SPOPO43791 374 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 BUB1BO60566 1050 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms