RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ZDHHC7	Q9NXF8	308 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DDX56	Q9NY93	547 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783		H3BNX3	289 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FOXD2	O60548	495 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DNAJA2	O60884	412 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CRTAM	O95727	393 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTPN2	P17706	415 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTPN1	P18031	435 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	YWHAQ	P27348	245 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MIP	P30301	263 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SERPINB5	P36952	375 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NNMT	P40261	264 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RAP1GAP	P47736	663 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC1A6	P48664	564 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDH6	P55285	790 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PKNOX1	P55347	436 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC25A11	Q02978	314 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC39A12	Q504Y0	691 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	VARS2	Q5ST30	1063 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PDPK2P	Q6A1A2	396 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CASC4	Q6P4E1	433 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UNC5A	Q6ZN44	842 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRIM67	Q6ZTA4	783 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTAR1	Q7Z6K3	402 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRIM42	Q8IWZ5	723 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GRIN3A	Q8TCU5	1115 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMIGD2	Q96BF3	282 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATXN7L3B	Q96GX2	97 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CEP295NL	Q96MC4	621 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRPC7	Q9HCX4	862 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	THAP1	Q9NVV9	213 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COMMD8	Q9NX08	183 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DNAJB4	Q9UDY4	337 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CYTH4	Q9UIA0	394 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPS17	Q9Y2R5	130 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TCRBV5S1A1T	A0A578	114 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XPO1	O14980	1071 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCNT2	O60583	730 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SNN	O75324	88 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	STAU1	O95793	577 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IGHA2	P01877	340 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C1QA	P02745	245 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CKM	P06732	381 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IMPDH2	P12268	514 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AOC1	P19801	751 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FUT4	P22083	530 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RBL1	P28749	1068 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC5A2	P31639	672 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TNFSF9	P41273	254 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BRCC3	P46736	316 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IDH3A	P50213	366 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RABGGTB	P53611	331 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BST2	Q10589	180 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DBN1	Q16643	649 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TEDDM1	Q5T9Z0	273 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LGSN	Q5TDP6	509 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SCYL2	Q6P3W7	929 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C10orf107	Q8IVU9	208 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RIN3	Q8TB24	985 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PIWIL2	Q8TC59	973 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CSGALNACT1	Q8TDX6	532 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM40	Q8WWA1	233 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPL38	Q96DV4	380 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CISH	Q9NSE2	258 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARHGEF38	Q9NXL2	777 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AP4B1	Q9Y6B7	739 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDY1	Q9Y6F8	540 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPL42	Q9Y6G3	142 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRAV19	A0A0A6YYK7	116 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NEMP1	O14524	444 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LSM8	O95777	96 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ASS1	P00966	412 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	WARS	P23381	471 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DDX6	P26196	483 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HOXA11	P31270	313 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ABCG1	P45844	678 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CLCNKB	P51801	687 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OXCT1	P55809	520 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LILRA4	P59901	499 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDKL1	Q00532	357 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MYBPC1	Q00872	1141 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	WASHC5	Q12768	1159 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KCNJ11	Q14654	390 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GOLGA7B	Q2TAP0	167 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LRIT3	Q3SXY7	679 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RNF219	Q5W0B1	726 aa	Predicted RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PGM2L1	Q6PCE3	622 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CAND1	Q86VP6	1230 aa	Known RBP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DEPDC1B	Q8WUY9	529 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GDF15	Q99988	308 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCDC28B	Q9BUN5	200 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATXN3L	Q9H3M9	355 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	POPDC2	Q9HBU9	364 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTTG2	Q9NZH5	202 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FBXL21	Q9UKT6	434 aa		5.76	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	STX16-NPEPL1	H3BU86	382 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BOLA2-SMG1P6	H3BVE0	249 aa		5.75	□□□□□ -1.49

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