RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ARF5P84085 180 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SLC25A11Q02978 314 aaKnown RBP11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SMTNL2Q2TAL5 461 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 HNRNPA1L2Q32P51 320 aaKnown RBP11.66□□□□□ -0.54
TMEM258-205ENST00000540434 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 ERMARDQ5T6L9 678 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SDE2Q6IQ49 451 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 RAD9BQ6WBX8 426 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 H2AFVQ71UI9 128 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 TRMT11Q7Z4G4 463 aaKnown RBP11.66□□□□□ -0.54
TMEM258-205ENST00000540434 VPS36Q86VN1 386 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 TMPRSS6Q8IU80 811 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 RGL4Q8IZJ4 473 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 CCDC42Q96M95 316 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 ACE2Q9BYF1 805 aaPredicted RBP11.66□□□□□ -0.54
TMEM258-205ENST00000540434 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
TMEM258-205ENST00000540434 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 TMEM248Q9NWD8 314 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 CYP8B1Q9UNU6 501 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 PLA2G4CQ9UP65 541 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 SCINQ9Y6U3 715 aa11.66□□□□□ -0.54
TMEM258-205ENST00000540434 TEX51A0A1B0GUA7 166 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ILVBLA1L0T0 632 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 LCA5LO95447 670 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SRPRAP08240 638 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 CD48P09326 243 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 TMEM253P0C7T8 217 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 C7P10643 843 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SRCP12931 536 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 IL4RP24394 825 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 BNC1Q01954 994 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 GNA12Q03113 381 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 MTA1Q13330 715 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SLC12A1Q13621 1099 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 EFHC2Q5JST6 749 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 COLEC12Q5KU26 742 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 DHRS13Q6UX07 377 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 KIAA1324Q6UXG2 1013 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SETD3Q86TU7 594 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 STK40Q8N2I9 435 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SH2D3CQ8N5H7 860 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 NIPA2Q8N8Q9 360 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 OR2T3Q8NH03 318 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ZNF564Q8TBZ8 553 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 RHBDD1Q8TEB9 315 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 DNASE2BQ8WZ79 361 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ARHGEF2Q92974 986 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 TBC1D31Q96DN5 1066 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 TRIM11Q96F44 468 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SPON2Q9BUD6 331 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 TRIM4Q9C037 500 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ZDHHC5Q9C0B5 715 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 MUC3BQ9H195 1237 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 DEF6Q9H4E7 631 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ZWILCHQ9H900 591 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 MRPL47Q9HD33 250 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 ZNHIT6Q9NWK9 470 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 CWC15Q9P013 229 aaKnown RBP11.65□□□□□ -0.54
TMEM258-205ENST00000540434 CTTNBP2NLQ9P2B4 639 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SERGEFQ9UGK8 458 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.54
TMEM258-205ENST00000540434 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
TMEM258-205ENST00000540434 B8ZZF3 427 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 NPC1O15118 1278 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ATP9BO43861 1147 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 SLC28A2O43868 658 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 RNF8O76064 485 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ASLP04424 464 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 TPM1P09493 284 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 AMPD1P23109 780 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 EPHB2P29323 1055 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 PCK1P35558 622 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 TPMTP51580 245 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ARSEP51690 589 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 DLG2Q15700 870 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
TMEM258-205ENST00000540434 PPP6R3Q5H9R7 873 aaPredicted RBP11.64□□□□□ -0.55
TMEM258-205ENST00000540434 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ARHGAP36Q6ZRI8 547 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 GALNT15Q8N3T1 639 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 NPWQ8N729 165 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 RTL3Q8N8U3 475 aaKnown RBP11.64□□□□□ -0.55
TMEM258-205ENST00000540434 HSPH1Q92598 858 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 HMCESQ96FZ2 354 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 KLHL11Q9NVR0 708 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 USP36Q9P275 1121 aaKnown RBP11.64□□□□□ -0.55
TMEM258-205ENST00000540434 SUSD2Q9UGT4 822 aa11.64□□□□□ -0.55
TMEM258-205ENST00000540434 FNDC3AQ9Y2H6 1198 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms