RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TRPV6Q9H1D0 765 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ABI2Q9NYB9 513 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 KDM3AQ9Y4C1 1321 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 POLR1CO15160 346 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TGFB1I1O43294 461 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 SPATA31C1P0DKV0 1188 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 RFX1P22670 979 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GJC1P36383 396 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC12A3P55017 1021 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 FMO1Q01740 532 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 MAPK11Q15759 364 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 MAMDC4Q6UXC1 1216 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 PIWIL3Q7Z3Z3 882 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 PTAR1Q7Z6K3 402 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TTC30BQ8N4P2 665 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 OR13F1Q8NGS4 319 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 LMO3Q8TAP4 145 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GPN2Q9H9Y4 310 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TBC1D22BQ9NU19 505 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GMIPQ9P107 970 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 SUCOQ9UBS9 1254 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 IPO11Q9UI26 975 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ENPP5Q9UJA9 477 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 VPS28Q9UK41 221 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TCAF1Q9Y4C2 921 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TESMINQ9Y4I5 508 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 DGKBQ9Y6T7 804 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 hCG_2039718K7EN88 272 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ACOT8O14734 319 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 AREL1O15033 823 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 CFLARO15519 480 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GCNT3O95395 438 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 IFNB1P01574 187 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 UGT2B4P06133 528 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 PRKACAP17612 351 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 CD58P19256 250 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ME2P23368 584 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 MYF6P23409 242 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 HADHAP40939 763 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 CASP3P42574 277 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TNK2Q07912 1038 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 BFSP2Q13515 415 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TEDDM1Q5T9Z0 273 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 RSBN1Q5VWQ0 802 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 KCNT2Q6UVM3 1135 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 IDO2Q6ZQW0 420 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 KIAA0408Q6ZU52 694 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ARMCX2Q7L311 632 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ARCQ7LC44 396 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 FBXO16Q8IX29 292 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 SPARTQ8N0X7 666 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 KYQ8NBH2 561 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 FNIP1Q8TF40 1166 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 VPS33AQ96AX1 596 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 GLT1D1Q96MS3 346 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 LENG8Q96PV6 779 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 HSD17B14Q9BPX1 270 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TUBA1CQ9BQE3 449 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 REEP2Q9BRK0 252 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF717Q9BY31 904 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 ARHGAP39Q9C0H5 1083 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 PNPOQ9NVS9 261 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 DNAJC28Q9NX36 388 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 MAU2Q9Y6X3 613 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 CENPFP49454 3210 aa9.6□□□□□ -0.87
CTNNA1-243ENST00000540387 TCRBV9S1A1TA0A576 114 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC15A5A6NIM6 579 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ZW10O43264 779 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 RFPL2O75678 378 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 NADKO95544 446 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CCNE2O96020 404 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 MX2P20592 715 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 IL32P24001 234 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ICAM3P32942 547 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PTPN9P43378 593 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 QARSP47897 775 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 LEPRP48357 1165 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SP4Q02446 784 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CDC20Q12834 499 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 HERC3Q15034 1050 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 STK11Q15831 433 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 INSCQ1MX18 579 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 MORN1Q5T089 497 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 TTC39BQ5VTQ0 682 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 POTEGQ6S5H5 508 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PRR23BQ6ZRT6 265 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ZBTB49Q6ZSB9 765 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC47A2Q86VL8 602 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PARP8Q8N3A8 854 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ZFP90Q8TF47 636 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 RAB2BQ8WUD1 216 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms